Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RNF43Q68DV7 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF43Q68DV7 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.67■□□□□ 0.26
RNF43Q68DV7 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RNF43Q68DV7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
RNF43Q68DV7 RPL37AP1-201ENST00000412502 279 ntBASIC16.67■□□□□ 0.26
RNF43Q68DV7 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF43Q68DV7 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF43Q68DV7 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.67■□□□□ 0.26
RNF43Q68DV7 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.67■□□□□ 0.26
RNF43Q68DV7 GPR53P-205ENST00000457298 1084 ntBASIC16.67■□□□□ 0.26
RNF43Q68DV7 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF43Q68DV7 AL079307.3-201ENST00000556114 283 ntBASIC16.67■□□□□ 0.26
RNF43Q68DV7 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.67■□□□□ 0.26
RNF43Q68DV7 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF43Q68DV7 AL844908.2-201ENST00000609461 460 ntBASIC16.67■□□□□ 0.26
RNF43Q68DV7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF43Q68DV7 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF43Q68DV7 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF43Q68DV7 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF43Q68DV7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.67■□□□□ 0.26
RNF43Q68DV7 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF43Q68DV7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.67■□□□□ 0.26
RNF43Q68DV7 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF43Q68DV7 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF43Q68DV7 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF43Q68DV7 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF43Q68DV7 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF43Q68DV7 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF43Q68DV7 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF43Q68DV7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF43Q68DV7 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF43Q68DV7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF43Q68DV7 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF43Q68DV7 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF43Q68DV7 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF43Q68DV7 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF43Q68DV7 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF43Q68DV7 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF43Q68DV7 AL592424.1-201ENST00000563624 1536 ntBASIC16.66■□□□□ 0.26
RNF43Q68DV7 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF43Q68DV7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF43Q68DV7 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF43Q68DV7 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
RNF43Q68DV7 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RNF43Q68DV7 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF43Q68DV7 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RNF43Q68DV7 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF43Q68DV7 IGHV3-71-201ENST00000523324 359 ntBASIC16.66■□□□□ 0.26
RNF43Q68DV7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.66■□□□□ 0.26
RNF43Q68DV7 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.66■□□□□ 0.26
RNF43Q68DV7 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF43Q68DV7 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF43Q68DV7 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF43Q68DV7 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF43Q68DV7 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF43Q68DV7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.66■□□□□ 0.26
RNF43Q68DV7 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF43Q68DV7 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RNF43Q68DV7 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF43Q68DV7 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF43Q68DV7 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF43Q68DV7 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF43Q68DV7 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF43Q68DV7 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
RNF43Q68DV7 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF43Q68DV7 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF43Q68DV7 CETN4P-206ENST00000642099 2168 ntBASIC16.65■□□□□ 0.26
RNF43Q68DV7 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF43Q68DV7 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF43Q68DV7 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF43Q68DV7 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF43Q68DV7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF43Q68DV7 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF43Q68DV7 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF43Q68DV7 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF43Q68DV7 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF43Q68DV7 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF43Q68DV7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF43Q68DV7 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.65■□□□□ 0.26
RNF43Q68DV7 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF43Q68DV7 AC027369.6-201ENST00000525520 931 ntBASIC16.65■□□□□ 0.26
RNF43Q68DV7 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF43Q68DV7 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
RNF43Q68DV7 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
RNF43Q68DV7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF43Q68DV7 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RNF43Q68DV7 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RNF43Q68DV7 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RNF43Q68DV7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF43Q68DV7 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF43Q68DV7 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF43Q68DV7 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF43Q68DV7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF43Q68DV7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF43Q68DV7 AC087499.5-201ENST00000452760 1342 ntBASIC16.65■□□□□ 0.26
RNF43Q68DV7 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF43Q68DV7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF43Q68DV7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RNF43Q68DV7 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms