Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC93Q567U6 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC93Q567U6 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC93Q567U6 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC93Q567U6 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC93Q567U6 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC93Q567U6 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC93Q567U6 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CCDC93Q567U6 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC93Q567U6 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC93Q567U6 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC19.33■□□□□ 0.69
CCDC93Q567U6 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.33■□□□□ 0.69
CCDC93Q567U6 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CCDC93Q567U6 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.33■□□□□ 0.69
CCDC93Q567U6 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC93Q567U6 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC93Q567U6 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC93Q567U6 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.33■□□□□ 0.69
CCDC93Q567U6 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC93Q567U6 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC93Q567U6 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC19.33■□□□□ 0.69
CCDC93Q567U6 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC93Q567U6 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC93Q567U6 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CCDC93Q567U6 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC19.33■□□□□ 0.68
CCDC93Q567U6 GUK1-206ENST00000366723 845 ntTSL 5 BASIC19.33■□□□□ 0.68
CCDC93Q567U6 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC93Q567U6 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC93Q567U6 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC19.33■□□□□ 0.68
CCDC93Q567U6 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC93Q567U6 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC93Q567U6 ACTG1P17-201ENST00000558391 1119 ntBASIC19.33■□□□□ 0.68
CCDC93Q567U6 HNRNPA1P48-202ENST00000565308 961 ntBASIC19.33■□□□□ 0.68
CCDC93Q567U6 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC19.33■□□□□ 0.68
CCDC93Q567U6 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC19.33■□□□□ 0.68
CCDC93Q567U6 MIR4741-201ENST00000579822 90 ntBASIC19.33■□□□□ 0.68
CCDC93Q567U6 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC19.33■□□□□ 0.68
CCDC93Q567U6 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
CCDC93Q567U6 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
CCDC93Q567U6 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC19.33■□□□□ 0.68
CCDC93Q567U6 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC93Q567U6 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC93Q567U6 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC93Q567U6 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC93Q567U6 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC93Q567U6 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC93Q567U6 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC93Q567U6 DRD5P1-201ENST00000456605 1438 ntBASIC19.33■□□□□ 0.68
CCDC93Q567U6 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC93Q567U6 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC93Q567U6 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CCDC93Q567U6 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC93Q567U6 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC93Q567U6 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC93Q567U6 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC93Q567U6 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC93Q567U6 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CCDC93Q567U6 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC93Q567U6 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC93Q567U6 FLJ38576-201ENST00000623820 2459 ntBASIC19.32■□□□□ 0.68
CCDC93Q567U6 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
CCDC93Q567U6 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC93Q567U6 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC93Q567U6 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CCDC93Q567U6 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC93Q567U6 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC93Q567U6 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC93Q567U6 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC93Q567U6 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CCDC93Q567U6 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC93Q567U6 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC19.32■□□□□ 0.68
CCDC93Q567U6 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC93Q567U6 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC93Q567U6 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC93Q567U6 SCARNA20.5-201ENST00000516991 142 ntBASIC19.32■□□□□ 0.68
CCDC93Q567U6 AP001582.1-201ENST00000525856 295 ntBASIC19.32■□□□□ 0.68
CCDC93Q567U6 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC93Q567U6 AC107373.2-201ENST00000607735 490 ntBASIC19.32■□□□□ 0.68
CCDC93Q567U6 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CCDC93Q567U6 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC93Q567U6 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC93Q567U6 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC93Q567U6 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC93Q567U6 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC93Q567U6 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC93Q567U6 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
CCDC93Q567U6 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC93Q567U6 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC93Q567U6 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC93Q567U6 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC93Q567U6 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC93Q567U6 AHCYP2-201ENST00000430630 1300 ntBASIC19.31■□□□□ 0.68
CCDC93Q567U6 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC93Q567U6 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC93Q567U6 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC93Q567U6 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC93Q567U6 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC93Q567U6 AC138028.6-201ENST00000616106 1482 ntBASIC19.31■□□□□ 0.68
CCDC93Q567U6 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC93Q567U6 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms