Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 ACTG1P2-201ENST00000415776 1125 ntBASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 ACTG1P11-201ENST00000425411 1125 ntBASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 AC022217.1-201ENST00000521069 738 ntBASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 AC141586.1-203ENST00000567242 366 ntBASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 CENPX-208ENST00000584347 799 ntTSL 2 BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 AC244157.2-201ENST00000616239 1006 ntBASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 AL138688.1-201ENST00000624851 1594 ntBASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 AC116353.5-201ENST00000638148 1699 ntBASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 GPAA1P2-202ENST00000606848 1787 ntBASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 KRT8P35-201ENST00000483942 1338 ntBASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 AL512652.2-201ENST00000625156 1716 ntBASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 RPSAP31-201ENST00000416648 895 ntBASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 AC011742.3-201ENST00000439053 820 ntBASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 AC005740.2-201ENST00000511085 419 ntBASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 ECM1P1-201ENST00000604092 1279 ntBASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 AL645939.5-201ENST00000606834 243 ntBASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 AC025181.2-201ENST00000606994 802 ntBASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 AC100757.4-201ENST00000626934 759 ntBASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.21■□□□□ 0.03
RSPO4Q2I0M5 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.21■□□□□ 0.02
RSPO4Q2I0M5 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.21■□□□□ 0.02
RSPO4Q2I0M5 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RSPO4Q2I0M5 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RSPO4Q2I0M5 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.21■□□□□ 0.02
RSPO4Q2I0M5 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms