Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DSC1Q08554 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
DSC1Q08554 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
DSC1Q08554 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
DSC1Q08554 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
DSC1Q08554 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DSC1Q08554 MIR1908-201ENST00000410394 80 ntBASIC16.68■□□□□ 0.26
DSC1Q08554 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
DSC1Q08554 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
DSC1Q08554 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
DSC1Q08554 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.68■□□□□ 0.26
DSC1Q08554 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.68■□□□□ 0.26
DSC1Q08554 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.68■□□□□ 0.26
DSC1Q08554 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.68■□□□□ 0.26
DSC1Q08554 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
DSC1Q08554 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
DSC1Q08554 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
DSC1Q08554 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DSC1Q08554 PCDH8P1-201ENST00000428983 2773 ntBASIC16.68■□□□□ 0.26
DSC1Q08554 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.68■□□□□ 0.26
DSC1Q08554 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
DSC1Q08554 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
DSC1Q08554 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
DSC1Q08554 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
DSC1Q08554 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DSC1Q08554 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DSC1Q08554 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.68■□□□□ 0.26
DSC1Q08554 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.67■□□□□ 0.26
DSC1Q08554 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.67■□□□□ 0.26
DSC1Q08554 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DSC1Q08554 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DSC1Q08554 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
DSC1Q08554 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.67■□□□□ 0.26
DSC1Q08554 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DSC1Q08554 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DSC1Q08554 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.67■□□□□ 0.26
DSC1Q08554 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.67■□□□□ 0.26
DSC1Q08554 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DSC1Q08554 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.67■□□□□ 0.26
DSC1Q08554 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.67■□□□□ 0.26
DSC1Q08554 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DSC1Q08554 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DSC1Q08554 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DSC1Q08554 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.67■□□□□ 0.26
DSC1Q08554 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DSC1Q08554 CNN2P8-201ENST00000421872 913 ntBASIC16.67■□□□□ 0.26
DSC1Q08554 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.67■□□□□ 0.26
DSC1Q08554 ACTBP11-201ENST00000436287 1126 ntBASIC16.67■□□□□ 0.26
DSC1Q08554 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.67■□□□□ 0.26
DSC1Q08554 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.67■□□□□ 0.26
DSC1Q08554 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
DSC1Q08554 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DSC1Q08554 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.67■□□□□ 0.26
DSC1Q08554 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.67■□□□□ 0.26
DSC1Q08554 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.67■□□□□ 0.26
DSC1Q08554 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.67■□□□□ 0.26
DSC1Q08554 AC025279.2-201ENST00000569730 653 ntBASIC16.67■□□□□ 0.26
DSC1Q08554 RHOXF1P1-202ENST00000635473 501 ntBASIC16.67■□□□□ 0.26
DSC1Q08554 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.67■□□□□ 0.26
DSC1Q08554 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DSC1Q08554 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
DSC1Q08554 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
DSC1Q08554 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.67■□□□□ 0.26
DSC1Q08554 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
DSC1Q08554 AL603832.2-201ENST00000566195 2125 ntBASIC16.67■□□□□ 0.26
DSC1Q08554 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DSC1Q08554 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
DSC1Q08554 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DSC1Q08554 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DSC1Q08554 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DSC1Q08554 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
DSC1Q08554 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DSC1Q08554 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.67■□□□□ 0.26
DSC1Q08554 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.67■□□□□ 0.26
DSC1Q08554 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DSC1Q08554 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DSC1Q08554 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DSC1Q08554 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
DSC1Q08554 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.66■□□□□ 0.26
DSC1Q08554 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
DSC1Q08554 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DSC1Q08554 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DSC1Q08554 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.66■□□□□ 0.26
DSC1Q08554 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.66■□□□□ 0.26
DSC1Q08554 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DSC1Q08554 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.66■□□□□ 0.26
DSC1Q08554 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.66■□□□□ 0.26
DSC1Q08554 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
DSC1Q08554 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
DSC1Q08554 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DSC1Q08554 AC026954.1-201ENST00000429771 1293 ntBASIC16.66■□□□□ 0.26
DSC1Q08554 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
DSC1Q08554 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DSC1Q08554 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.66■□□□□ 0.26
DSC1Q08554 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DSC1Q08554 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.66■□□□□ 0.26
DSC1Q08554 AC079316.1-201ENST00000548397 411 ntBASIC16.66■□□□□ 0.26
DSC1Q08554 AC025181.2-201ENST00000606994 802 ntBASIC16.66■□□□□ 0.26
DSC1Q08554 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DSC1Q08554 CYP2T1P-202ENST00000641596 2535 ntBASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms