Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LTBQ06643 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.52□□□□□ -0.08
LTBQ06643 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
LTBQ06643 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.08
LTBQ06643 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LTBQ06643 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
LTBQ06643 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LTBQ06643 UXT-AS1-201ENST00000590504 1525 ntBASIC14.52□□□□□ -0.08
LTBQ06643 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
LTBQ06643 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.08
LTBQ06643 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
LTBQ06643 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.52□□□□□ -0.08
LTBQ06643 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LTBQ06643 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LTBQ06643 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.52□□□□□ -0.08
LTBQ06643 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.52□□□□□ -0.09
LTBQ06643 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LTBQ06643 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.52□□□□□ -0.09
LTBQ06643 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.52□□□□□ -0.09
LTBQ06643 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LTBQ06643 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.52□□□□□ -0.09
LTBQ06643 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
LTBQ06643 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.52□□□□□ -0.09
LTBQ06643 BASP1P1-201ENST00000430708 665 ntBASIC14.52□□□□□ -0.09
LTBQ06643 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.52□□□□□ -0.09
LTBQ06643 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.52□□□□□ -0.09
LTBQ06643 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.52□□□□□ -0.09
LTBQ06643 TSPY16P-201ENST00000449843 468 ntBASIC14.52□□□□□ -0.09
LTBQ06643 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.52□□□□□ -0.09
LTBQ06643 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.52□□□□□ -0.09
LTBQ06643 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.52□□□□□ -0.09
LTBQ06643 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.52□□□□□ -0.09
LTBQ06643 RNA5SP410-201ENST00000516285 106 ntBASIC14.52□□□□□ -0.09
LTBQ06643 IGHV3-62-201ENST00000520057 340 ntBASIC14.52□□□□□ -0.09
LTBQ06643 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.52□□□□□ -0.09
LTBQ06643 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.52□□□□□ -0.09
LTBQ06643 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.52□□□□□ -0.09
LTBQ06643 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.52□□□□□ -0.09
LTBQ06643 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.52□□□□□ -0.09
LTBQ06643 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.52□□□□□ -0.09
LTBQ06643 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.52□□□□□ -0.09
LTBQ06643 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.52□□□□□ -0.09
LTBQ06643 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LTBQ06643 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LTBQ06643 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
LTBQ06643 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.52□□□□□ -0.09
LTBQ06643 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LTBQ06643 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
LTBQ06643 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LTBQ06643 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LTBQ06643 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LTBQ06643 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LTBQ06643 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LTBQ06643 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LTBQ06643 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.51□□□□□ -0.09
LTBQ06643 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LTBQ06643 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LTBQ06643 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LTBQ06643 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
LTBQ06643 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.51□□□□□ -0.09
LTBQ06643 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.51□□□□□ -0.09
LTBQ06643 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LTBQ06643 AC067930.6-201ENST00000623257 4947 ntBASIC14.51□□□□□ -0.09
LTBQ06643 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LTBQ06643 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.51□□□□□ -0.09
LTBQ06643 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.51□□□□□ -0.09
LTBQ06643 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LTBQ06643 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LTBQ06643 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.51□□□□□ -0.09
LTBQ06643 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LTBQ06643 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
LTBQ06643 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LTBQ06643 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LTBQ06643 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.51□□□□□ -0.09
LTBQ06643 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LTBQ06643 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.51□□□□□ -0.09
LTBQ06643 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LTBQ06643 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LTBQ06643 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.51□□□□□ -0.09
LTBQ06643 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LTBQ06643 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LTBQ06643 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.51□□□□□ -0.09
LTBQ06643 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.51□□□□□ -0.09
LTBQ06643 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.51□□□□□ -0.09
LTBQ06643 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.51□□□□□ -0.09
LTBQ06643 RN7SL204P-201ENST00000582831 262 ntBASIC14.51□□□□□ -0.09
LTBQ06643 AC022145.2-201ENST00000598203 171 ntBASIC14.51□□□□□ -0.09
LTBQ06643 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LTBQ06643 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
LTBQ06643 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.51□□□□□ -0.09
LTBQ06643 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
LTBQ06643 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.51□□□□□ -0.09
LTBQ06643 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LTBQ06643 AL136982.4-201ENST00000437689 1740 ntBASIC14.51□□□□□ -0.09
LTBQ06643 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LTBQ06643 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LTBQ06643 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.51□□□□□ -0.09
LTBQ06643 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
LTBQ06643 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.51□□□□□ -0.09
LTBQ06643 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms