Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.31■□□□□ 0.04
HMGCS1Q01581 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCS1Q01581 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCS1Q01581 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCS1Q01581 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCS1Q01581 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCS1Q01581 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.31■□□□□ 0.04
HMGCS1Q01581 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.31■□□□□ 0.04
HMGCS1Q01581 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCS1Q01581 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCS1Q01581 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCS1Q01581 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCS1Q01581 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCS1Q01581 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.31■□□□□ 0.04
HMGCS1Q01581 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCS1Q01581 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.31■□□□□ 0.04
HMGCS1Q01581 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCS1Q01581 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCS1Q01581 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCS1Q01581 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCS1Q01581 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCS1Q01581 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCS1Q01581 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCS1Q01581 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCS1Q01581 MKNK2P1-201ENST00000437526 628 ntBASIC15.31■□□□□ 0.04
HMGCS1Q01581 AL139010.1-201ENST00000454878 894 ntBASIC15.31■□□□□ 0.04
HMGCS1Q01581 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.31■□□□□ 0.04
HMGCS1Q01581 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.31■□□□□ 0.04
HMGCS1Q01581 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.31■□□□□ 0.04
HMGCS1Q01581 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.31■□□□□ 0.04
HMGCS1Q01581 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.31■□□□□ 0.04
HMGCS1Q01581 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.31■□□□□ 0.04
HMGCS1Q01581 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
HMGCS1Q01581 AC023511.2-201ENST00000618803 211 ntBASIC15.31■□□□□ 0.04
HMGCS1Q01581 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.31■□□□□ 0.04
HMGCS1Q01581 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCS1Q01581 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HMGCS1Q01581 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.31■□□□□ 0.04
HMGCS1Q01581 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCS1Q01581 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.31■□□□□ 0.04
HMGCS1Q01581 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.31■□□□□ 0.04
HMGCS1Q01581 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCS1Q01581 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCS1Q01581 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.31■□□□□ 0.04
HMGCS1Q01581 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.31■□□□□ 0.04
HMGCS1Q01581 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.31■□□□□ 0.04
HMGCS1Q01581 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCS1Q01581 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCS1Q01581 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.31■□□□□ 0.04
HMGCS1Q01581 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCS1Q01581 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCS1Q01581 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.31■□□□□ 0.04
HMGCS1Q01581 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCS1Q01581 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
HMGCS1Q01581 LINC02228-204ENST00000642115 2962 ntBASIC15.3■□□□□ 0.04
HMGCS1Q01581 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCS1Q01581 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCS1Q01581 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCS1Q01581 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCS1Q01581 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCS1Q01581 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCS1Q01581 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
HMGCS1Q01581 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCS1Q01581 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCS1Q01581 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCS1Q01581 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCS1Q01581 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
HMGCS1Q01581 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCS1Q01581 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCS1Q01581 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCS1Q01581 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
HMGCS1Q01581 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCS1Q01581 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCS1Q01581 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.3■□□□□ 0.04
HMGCS1Q01581 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCS1Q01581 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.3■□□□□ 0.04
HMGCS1Q01581 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.3■□□□□ 0.04
HMGCS1Q01581 KRT8P37-201ENST00000451609 1420 ntBASIC15.3■□□□□ 0.04
HMGCS1Q01581 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.3■□□□□ 0.04
HMGCS1Q01581 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCS1Q01581 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCS1Q01581 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.3■□□□□ 0.04
HMGCS1Q01581 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.3■□□□□ 0.04
HMGCS1Q01581 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.3■□□□□ 0.04
HMGCS1Q01581 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.3■□□□□ 0.04
HMGCS1Q01581 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.3■□□□□ 0.04
HMGCS1Q01581 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.3■□□□□ 0.04
HMGCS1Q01581 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.3■□□□□ 0.04
HMGCS1Q01581 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCS1Q01581 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
HMGCS1Q01581 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCS1Q01581 MIR3687-2-201ENST00000577708 61 ntBASIC15.3■□□□□ 0.04
HMGCS1Q01581 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
HMGCS1Q01581 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.3■□□□□ 0.04
HMGCS1Q01581 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.3■□□□□ 0.04
HMGCS1Q01581 MIR3687-1-201ENST00000614492 61 ntBASIC15.3■□□□□ 0.04
HMGCS1Q01581 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
HMGCS1Q01581 C18orf15-201ENST00000623680 2534 ntBASIC15.3■□□□□ 0.04
HMGCS1Q01581 AC112693.3-201ENST00000624819 1983 ntBASIC15.3■□□□□ 0.04
HMGCS1Q01581 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms