Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2NP61088 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.99□□□□□ -0.17
UBE2NP61088 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2NP61088 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.99□□□□□ -0.17
UBE2NP61088 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2NP61088 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2NP61088 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.99□□□□□ -0.17
UBE2NP61088 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2NP61088 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2NP61088 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.99□□□□□ -0.17
UBE2NP61088 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2NP61088 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
UBE2NP61088 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2NP61088 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2NP61088 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
UBE2NP61088 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2NP61088 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.99□□□□□ -0.17
UBE2NP61088 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.99□□□□□ -0.17
UBE2NP61088 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.99□□□□□ -0.17
UBE2NP61088 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2NP61088 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2NP61088 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.99□□□□□ -0.17
UBE2NP61088 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.98□□□□□ -0.17
UBE2NP61088 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.98□□□□□ -0.17
UBE2NP61088 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
UBE2NP61088 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2NP61088 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2NP61088 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
UBE2NP61088 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2NP61088 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
UBE2NP61088 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.98□□□□□ -0.17
UBE2NP61088 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2NP61088 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2NP61088 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2NP61088 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.98□□□□□ -0.17
UBE2NP61088 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2NP61088 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.98□□□□□ -0.17
UBE2NP61088 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.98□□□□□ -0.17
UBE2NP61088 HMGN1P19-201ENST00000436976 333 ntBASIC13.98□□□□□ -0.17
UBE2NP61088 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.98□□□□□ -0.17
UBE2NP61088 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.98□□□□□ -0.17
UBE2NP61088 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.98□□□□□ -0.17
UBE2NP61088 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.98□□□□□ -0.17
UBE2NP61088 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.98□□□□□ -0.17
UBE2NP61088 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.98□□□□□ -0.17
UBE2NP61088 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.98□□□□□ -0.17
UBE2NP61088 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.98□□□□□ -0.17
UBE2NP61088 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.98□□□□□ -0.17
UBE2NP61088 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.98□□□□□ -0.17
UBE2NP61088 AJ011932.1-201ENST00000621707 465 ntBASIC13.98□□□□□ -0.17
UBE2NP61088 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.98□□□□□ -0.17
UBE2NP61088 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2NP61088 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
UBE2NP61088 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2NP61088 AC097376.2-205ENST00000610159 5334 ntBASIC13.98□□□□□ -0.17
UBE2NP61088 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.98□□□□□ -0.17
UBE2NP61088 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2NP61088 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2NP61088 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2NP61088 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
UBE2NP61088 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
UBE2NP61088 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2NP61088 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.98□□□□□ -0.17
UBE2NP61088 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2NP61088 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2NP61088 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.98□□□□□ -0.17
UBE2NP61088 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2NP61088 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2NP61088 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2NP61088 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2NP61088 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2NP61088 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2NP61088 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2NP61088 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2NP61088 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
UBE2NP61088 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2NP61088 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
UBE2NP61088 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2NP61088 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2NP61088 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
UBE2NP61088 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2NP61088 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2NP61088 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
UBE2NP61088 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
UBE2NP61088 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
UBE2NP61088 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.97□□□□□ -0.17
UBE2NP61088 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.97□□□□□ -0.17
UBE2NP61088 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.97□□□□□ -0.17
UBE2NP61088 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.97□□□□□ -0.17
UBE2NP61088 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2NP61088 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.97□□□□□ -0.17
UBE2NP61088 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.97□□□□□ -0.17
UBE2NP61088 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.97□□□□□ -0.17
UBE2NP61088 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.97□□□□□ -0.17
UBE2NP61088 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.97□□□□□ -0.17
UBE2NP61088 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2NP61088 AL096865.1-201ENST00000606796 927 ntBASIC13.97□□□□□ -0.17
UBE2NP61088 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2NP61088 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.97□□□□□ -0.17
UBE2NP61088 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms