Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.86□□□□□ -0.19
CLDN12P56749 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.86□□□□□ -0.19
CLDN12P56749 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC13.86□□□□□ -0.19
CLDN12P56749 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.86□□□□□ -0.19
CLDN12P56749 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13.86□□□□□ -0.19
CLDN12P56749 AL365330.1-201ENST00000607459 531 ntBASIC13.86□□□□□ -0.19
CLDN12P56749 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC13.86□□□□□ -0.19
CLDN12P56749 MIR1199-201ENST00000621445 119 ntBASIC13.86□□□□□ -0.19
CLDN12P56749 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.86□□□□□ -0.19
CLDN12P56749 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.86□□□□□ -0.19
CLDN12P56749 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.86□□□□□ -0.19
CLDN12P56749 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN12P56749 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN12P56749 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN12P56749 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CLDN12P56749 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
CLDN12P56749 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN12P56749 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN12P56749 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN12P56749 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN12P56749 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN12P56749 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.86□□□□□ -0.19
CLDN12P56749 AP001282.1-201ENST00000531301 1499 ntBASIC13.86□□□□□ -0.19
CLDN12P56749 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.86□□□□□ -0.19
CLDN12P56749 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.86□□□□□ -0.19
CLDN12P56749 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.86□□□□□ -0.19
CLDN12P56749 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN12P56749 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.86□□□□□ -0.19
CLDN12P56749 AC232323.1-201ENST00000540724 2099 ntBASIC13.86□□□□□ -0.19
CLDN12P56749 REXO1L5P-201ENST00000622260 2098 ntBASIC13.86□□□□□ -0.19
CLDN12P56749 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.86□□□□□ -0.19
CLDN12P56749 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CLDN12P56749 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN12P56749 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CLDN12P56749 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN12P56749 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN12P56749 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN12P56749 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.85□□□□□ -0.19
CLDN12P56749 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.85□□□□□ -0.19
CLDN12P56749 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CLDN12P56749 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN12P56749 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN12P56749 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN12P56749 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN12P56749 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN12P56749 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN12P56749 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN12P56749 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN12P56749 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CLDN12P56749 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.85□□□□□ -0.19
CLDN12P56749 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC13.85□□□□□ -0.19
CLDN12P56749 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN12P56749 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC13.85□□□□□ -0.19
CLDN12P56749 AC108073.2-201ENST00000464002 357 ntBASIC13.85□□□□□ -0.19
CLDN12P56749 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN12P56749 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC13.85□□□□□ -0.19
CLDN12P56749 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC13.85□□□□□ -0.19
CLDN12P56749 AF238378.1-201ENST00000526806 358 ntBASIC13.85□□□□□ -0.19
CLDN12P56749 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN12P56749 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.85□□□□□ -0.19
CLDN12P56749 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.85□□□□□ -0.19
CLDN12P56749 MIR3909-201ENST00000579518 119 ntBASIC13.85□□□□□ -0.19
CLDN12P56749 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.85□□□□□ -0.19
CLDN12P56749 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CLDN12P56749 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN12P56749 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN12P56749 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CLDN12P56749 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN12P56749 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.85□□□□□ -0.19
CLDN12P56749 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CLDN12P56749 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN12P56749 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.85□□□□□ -0.19
CLDN12P56749 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN12P56749 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN12P56749 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN12P56749 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN12P56749 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN12P56749 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN12P56749 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN12P56749 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CLDN12P56749 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN12P56749 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN12P56749 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN12P56749 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN12P56749 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN12P56749 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN12P56749 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CLDN12P56749 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.84□□□□□ -0.19
CLDN12P56749 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN12P56749 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN12P56749 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN12P56749 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13.84□□□□□ -0.19
CLDN12P56749 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CLDN12P56749 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN12P56749 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN12P56749 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.84□□□□□ -0.19
CLDN12P56749 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.84□□□□□ -0.19
CLDN12P56749 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC13.84□□□□□ -0.19
CLDN12P56749 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN12P56749 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms