Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PKNOX1P55347 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.62■□□□□ 0.09
PKNOX1P55347 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PKNOX1P55347 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PKNOX1P55347 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PKNOX1P55347 AKAP8P1-201ENST00000434743 1349 ntBASIC15.62■□□□□ 0.09
PKNOX1P55347 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.62■□□□□ 0.09
PKNOX1P55347 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PKNOX1P55347 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PKNOX1P55347 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PKNOX1P55347 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
PKNOX1P55347 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PKNOX1P55347 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PKNOX1P55347 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PKNOX1P55347 AL365209.1-201ENST00000624418 6473 ntBASIC15.62■□□□□ 0.09
PKNOX1P55347 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PKNOX1P55347 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
PKNOX1P55347 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PKNOX1P55347 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
PKNOX1P55347 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.61■□□□□ 0.09
PKNOX1P55347 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.61■□□□□ 0.09
PKNOX1P55347 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.61■□□□□ 0.09
PKNOX1P55347 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PKNOX1P55347 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PKNOX1P55347 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PKNOX1P55347 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.61■□□□□ 0.09
PKNOX1P55347 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PKNOX1P55347 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
PKNOX1P55347 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PKNOX1P55347 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PKNOX1P55347 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PKNOX1P55347 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PKNOX1P55347 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
PKNOX1P55347 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.61■□□□□ 0.09
PKNOX1P55347 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.61■□□□□ 0.09
PKNOX1P55347 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.61■□□□□ 0.09
PKNOX1P55347 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.61■□□□□ 0.09
PKNOX1P55347 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.61■□□□□ 0.09
PKNOX1P55347 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.61■□□□□ 0.09
PKNOX1P55347 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
PKNOX1P55347 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PKNOX1P55347 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PKNOX1P55347 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.61■□□□□ 0.09
PKNOX1P55347 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PKNOX1P55347 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PKNOX1P55347 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PKNOX1P55347 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
PKNOX1P55347 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.61■□□□□ 0.09
PKNOX1P55347 IL9RP2-201ENST00000423948 1312 ntBASIC15.61■□□□□ 0.09
PKNOX1P55347 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PKNOX1P55347 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.61■□□□□ 0.09
PKNOX1P55347 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PKNOX1P55347 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
PKNOX1P55347 ZNF259P1-201ENST00000407656 1365 ntBASIC15.61■□□□□ 0.09
PKNOX1P55347 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.61■□□□□ 0.09
PKNOX1P55347 AC087481.3-201ENST00000602886 1894 ntBASIC15.61■□□□□ 0.09
PKNOX1P55347 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.61■□□□□ 0.09
PKNOX1P55347 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PKNOX1P55347 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PKNOX1P55347 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.6■□□□□ 0.09
PKNOX1P55347 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PKNOX1P55347 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.6■□□□□ 0.09
PKNOX1P55347 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.6■□□□□ 0.09
PKNOX1P55347 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
PKNOX1P55347 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PKNOX1P55347 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
PKNOX1P55347 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PKNOX1P55347 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PKNOX1P55347 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PKNOX1P55347 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.6■□□□□ 0.09
PKNOX1P55347 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.6■□□□□ 0.09
PKNOX1P55347 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PKNOX1P55347 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PKNOX1P55347 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PKNOX1P55347 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.6■□□□□ 0.09
PKNOX1P55347 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.6■□□□□ 0.09
PKNOX1P55347 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PKNOX1P55347 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
PKNOX1P55347 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
PKNOX1P55347 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PKNOX1P55347 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PKNOX1P55347 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PKNOX1P55347 AL591424.1-201ENST00000442569 1213 ntBASIC15.6■□□□□ 0.09
PKNOX1P55347 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.6■□□□□ 0.09
PKNOX1P55347 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.6■□□□□ 0.09
PKNOX1P55347 RNA5SP416-201ENST00000516838 111 ntBASIC15.6■□□□□ 0.09
PKNOX1P55347 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.6■□□□□ 0.09
PKNOX1P55347 AL138918.1-201ENST00000568306 659 ntBASIC15.6■□□□□ 0.09
PKNOX1P55347 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.6■□□□□ 0.09
PKNOX1P55347 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.6■□□□□ 0.09
PKNOX1P55347 AC061975.2-201ENST00000581722 295 ntBASIC15.6■□□□□ 0.09
PKNOX1P55347 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PKNOX1P55347 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.6■□□□□ 0.09
PKNOX1P55347 AL513190.1-201ENST00000621254 727 ntBASIC15.6■□□□□ 0.09
PKNOX1P55347 AC026748.1-201ENST00000624349 3251 ntBASIC15.6■□□□□ 0.09
PKNOX1P55347 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.6■□□□□ 0.09
PKNOX1P55347 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.6■□□□□ 0.09
PKNOX1P55347 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PKNOX1P55347 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PKNOX1P55347 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms