Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CDH4P55283 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH4P55283 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH4P55283 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH4P55283 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH4P55283 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH4P55283 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH4P55283 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH4P55283 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH4P55283 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH4P55283 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH4P55283 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CDH4P55283 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
CDH4P55283 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CDH4P55283 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CDH4P55283 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH4P55283 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH4P55283 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH4P55283 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH4P55283 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.15■□□□□ 0.18
CDH4P55283 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.15■□□□□ 0.18
CDH4P55283 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.15■□□□□ 0.18
CDH4P55283 COX20P2-201ENST00000452636 358 ntBASIC16.15■□□□□ 0.18
CDH4P55283 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH4P55283 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH4P55283 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.15■□□□□ 0.18
CDH4P55283 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
CDH4P55283 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH4P55283 AC140912.1-201ENST00000577171 1054 ntBASIC16.15■□□□□ 0.18
CDH4P55283 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH4P55283 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.15■□□□□ 0.18
CDH4P55283 AC027307.3-201ENST00000594262 1100 ntBASIC16.15■□□□□ 0.18
CDH4P55283 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH4P55283 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH4P55283 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH4P55283 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH4P55283 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH4P55283 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH4P55283 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH4P55283 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH4P55283 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH4P55283 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH4P55283 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH4P55283 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH4P55283 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH4P55283 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH4P55283 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.15■□□□□ 0.18
CDH4P55283 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH4P55283 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CDH4P55283 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CDH4P55283 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CDH4P55283 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CDH4P55283 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
CDH4P55283 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CDH4P55283 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH4P55283 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH4P55283 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH4P55283 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH4P55283 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH4P55283 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH4P55283 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.14■□□□□ 0.17
CDH4P55283 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH4P55283 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH4P55283 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH4P55283 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.14■□□□□ 0.17
CDH4P55283 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH4P55283 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.14■□□□□ 0.17
CDH4P55283 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CDH4P55283 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH4P55283 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH4P55283 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.14■□□□□ 0.17
CDH4P55283 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH4P55283 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CDH4P55283 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.14■□□□□ 0.17
CDH4P55283 TP53TG3HP-202ENST00000569755 579 ntBASIC16.14■□□□□ 0.17
CDH4P55283 AC036164.1-201ENST00000570544 333 ntBASIC16.14■□□□□ 0.17
CDH4P55283 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.14■□□□□ 0.17
CDH4P55283 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CDH4P55283 AP003680.1-201ENST00000598970 3660 ntBASIC16.14■□□□□ 0.17
CDH4P55283 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.14■□□□□ 0.17
CDH4P55283 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CDH4P55283 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
CDH4P55283 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH4P55283 AC022188.1-201ENST00000620960 1664 ntBASIC16.14■□□□□ 0.17
CDH4P55283 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CDH4P55283 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH4P55283 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH4P55283 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH4P55283 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH4P55283 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CDH4P55283 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH4P55283 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.13■□□□□ 0.17
CDH4P55283 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH4P55283 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.13■□□□□ 0.17
CDH4P55283 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH4P55283 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH4P55283 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH4P55283 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH4P55283 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CDH4P55283 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms