Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
NR1H2P55055 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR1H2P55055 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR1H2P55055 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR1H2P55055 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NR1H2P55055 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR1H2P55055 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
NR1H2P55055 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
NR1H2P55055 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR1H2P55055 AC073621.1-201ENST00000392730 636 ntBASIC15.14■□□□□ 0.01
NR1H2P55055 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NR1H2P55055 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NR1H2P55055 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
NR1H2P55055 STK19B-204ENST00000512515 211 ntBASIC15.14■□□□□ 0.01
NR1H2P55055 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
NR1H2P55055 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.14■□□□□ 0.01
NR1H2P55055 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.14■□□□□ 0.01
NR1H2P55055 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.14■□□□□ 0.01
NR1H2P55055 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.14■□□□□ 0.01
NR1H2P55055 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.14■□□□□ 0.01
NR1H2P55055 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.14■□□□□ 0.01
NR1H2P55055 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.14■□□□□ 0.01
NR1H2P55055 AC010327.4-202ENST00000591484 748 ntBASIC15.14■□□□□ 0.01
NR1H2P55055 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.14■□□□□ 0.01
NR1H2P55055 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR1H2P55055 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.14■□□□□ 0.01
NR1H2P55055 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NR1H2P55055 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.14■□□□□ 0.01
NR1H2P55055 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR1H2P55055 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
NR1H2P55055 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
NR1H2P55055 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR1H2P55055 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR1H2P55055 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR1H2P55055 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR1H2P55055 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.14■□□□□ 0.01
NR1H2P55055 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
NR1H2P55055 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.14■□□□□ 0.01
NR1H2P55055 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
NR1H2P55055 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.14■□□□□ 0.01
NR1H2P55055 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.14■□□□□ 0.01
NR1H2P55055 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NR1H2P55055 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.14■□□□□ 0.01
NR1H2P55055 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
NR1H2P55055 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
NR1H2P55055 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NR1H2P55055 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.13■□□□□ 0.01
NR1H2P55055 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NR1H2P55055 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR1H2P55055 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NR1H2P55055 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
NR1H2P55055 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR1H2P55055 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR1H2P55055 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR1H2P55055 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.13■□□□□ 0.01
NR1H2P55055 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR1H2P55055 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR1H2P55055 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NR1H2P55055 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.13■□□□□ 0.01
NR1H2P55055 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR1H2P55055 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.13■□□□□ 0.01
NR1H2P55055 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
NR1H2P55055 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NR1H2P55055 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
NR1H2P55055 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.13■□□□□ 0.01
NR1H2P55055 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.13■□□□□ 0.01
NR1H2P55055 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.13■□□□□ 0.01
NR1H2P55055 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.13■□□□□ 0.01
NR1H2P55055 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.13■□□□□ 0.01
NR1H2P55055 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.13■□□□□ 0.01
NR1H2P55055 AC079781.4-201ENST00000641908 219 ntBASIC15.13■□□□□ 0.01
NR1H2P55055 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NR1H2P55055 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
NR1H2P55055 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.13■□□□□ 0.01
NR1H2P55055 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.13■□□□□ 0.01
NR1H2P55055 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.13■□□□□ 0.01
NR1H2P55055 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.13■□□□□ 0.01
NR1H2P55055 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR1H2P55055 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR1H2P55055 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR1H2P55055 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR1H2P55055 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR1H2P55055 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NR1H2P55055 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR1H2P55055 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR1H2P55055 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NR1H2P55055 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
NR1H2P55055 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NR1H2P55055 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NR1H2P55055 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NR1H2P55055 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.12■□□□□ 0.01
NR1H2P55055 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NR1H2P55055 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NR1H2P55055 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.12■□□□□ 0.01
NR1H2P55055 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NR1H2P55055 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NR1H2P55055 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
NR1H2P55055 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.12■□□□□ 0.01
NR1H2P55055 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
NR1H2P55055 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms