Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATP1B3P54709 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
ATP1B3P54709 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATP1B3P54709 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATP1B3P54709 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATP1B3P54709 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ATP1B3P54709 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.83□□□□□ -0.2
ATP1B3P54709 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATP1B3P54709 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATP1B3P54709 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.83□□□□□ -0.2
ATP1B3P54709 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.83□□□□□ -0.2
ATP1B3P54709 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
ATP1B3P54709 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATP1B3P54709 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATP1B3P54709 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATP1B3P54709 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.83□□□□□ -0.2
ATP1B3P54709 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
ATP1B3P54709 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.83□□□□□ -0.2
ATP1B3P54709 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ATP1B3P54709 AL590627.1-203ENST00000421194 1026 ntBASIC13.83□□□□□ -0.2
ATP1B3P54709 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ATP1B3P54709 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.83□□□□□ -0.2
ATP1B3P54709 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.83□□□□□ -0.2
ATP1B3P54709 AL591424.1-201ENST00000442569 1213 ntBASIC13.83□□□□□ -0.2
ATP1B3P54709 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.83□□□□□ -0.2
ATP1B3P54709 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.83□□□□□ -0.2
ATP1B3P54709 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ATP1B3P54709 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.83□□□□□ -0.2
ATP1B3P54709 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.83□□□□□ -0.2
ATP1B3P54709 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATP1B3P54709 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.83□□□□□ -0.2
ATP1B3P54709 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
ATP1B3P54709 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.83□□□□□ -0.2
ATP1B3P54709 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
ATP1B3P54709 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
ATP1B3P54709 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.83□□□□□ -0.2
ATP1B3P54709 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.83□□□□□ -0.2
ATP1B3P54709 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.83□□□□□ -0.2
ATP1B3P54709 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.83□□□□□ -0.2
ATP1B3P54709 RARRES2P8-201ENST00000566335 367 ntBASIC13.83□□□□□ -0.2
ATP1B3P54709 AP002472.1-201ENST00000577490 586 ntBASIC13.83□□□□□ -0.2
ATP1B3P54709 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.83□□□□□ -0.2
ATP1B3P54709 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
ATP1B3P54709 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.83□□□□□ -0.2
ATP1B3P54709 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.83□□□□□ -0.2
ATP1B3P54709 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.83□□□□□ -0.2
ATP1B3P54709 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATP1B3P54709 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATP1B3P54709 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATP1B3P54709 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATP1B3P54709 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
ATP1B3P54709 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
ATP1B3P54709 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATP1B3P54709 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATP1B3P54709 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATP1B3P54709 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.83□□□□□ -0.2
ATP1B3P54709 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.83□□□□□ -0.2
ATP1B3P54709 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
ATP1B3P54709 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.82□□□□□ -0.2
ATP1B3P54709 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ATP1B3P54709 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
ATP1B3P54709 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATP1B3P54709 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATP1B3P54709 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ATP1B3P54709 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.82□□□□□ -0.2
ATP1B3P54709 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATP1B3P54709 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ATP1B3P54709 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATP1B3P54709 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATP1B3P54709 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ATP1B3P54709 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.82□□□□□ -0.2
ATP1B3P54709 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.82□□□□□ -0.2
ATP1B3P54709 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.82□□□□□ -0.2
ATP1B3P54709 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.82□□□□□ -0.2
ATP1B3P54709 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATP1B3P54709 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATP1B3P54709 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATP1B3P54709 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.82□□□□□ -0.2
ATP1B3P54709 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
ATP1B3P54709 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATP1B3P54709 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATP1B3P54709 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATP1B3P54709 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.82□□□□□ -0.2
ATP1B3P54709 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.82□□□□□ -0.2
ATP1B3P54709 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.82□□□□□ -0.2
ATP1B3P54709 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.82□□□□□ -0.2
ATP1B3P54709 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.82□□□□□ -0.2
ATP1B3P54709 AC098859.1-201ENST00000502915 1238 ntBASIC13.82□□□□□ -0.2
ATP1B3P54709 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.82□□□□□ -0.2
ATP1B3P54709 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.82□□□□□ -0.2
ATP1B3P54709 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.82□□□□□ -0.2
ATP1B3P54709 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.82□□□□□ -0.2
ATP1B3P54709 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATP1B3P54709 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
ATP1B3P54709 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATP1B3P54709 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ATP1B3P54709 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATP1B3P54709 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
ATP1B3P54709 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.82□□□□□ -0.2
ATP1B3P54709 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms