Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PMS1P54277 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PMS1P54277 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PMS1P54277 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PMS1P54277 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PMS1P54277 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PMS1P54277 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.43■□□□□ 0.38
PMS1P54277 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PMS1P54277 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
PMS1P54277 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PMS1P54277 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PMS1P54277 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PMS1P54277 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PMS1P54277 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.43■□□□□ 0.38
PMS1P54277 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PMS1P54277 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC17.43■□□□□ 0.38
PMS1P54277 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.43■□□□□ 0.38
PMS1P54277 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PMS1P54277 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PMS1P54277 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PMS1P54277 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PMS1P54277 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.43■□□□□ 0.38
PMS1P54277 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.43■□□□□ 0.38
PMS1P54277 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.43■□□□□ 0.38
PMS1P54277 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.43■□□□□ 0.38
PMS1P54277 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PMS1P54277 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PMS1P54277 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.43■□□□□ 0.38
PMS1P54277 AC004835.2-201ENST00000603762 682 ntBASIC17.43■□□□□ 0.38
PMS1P54277 TCAF2P1-201ENST00000291129 2421 ntBASIC17.43■□□□□ 0.38
PMS1P54277 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PMS1P54277 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PMS1P54277 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PMS1P54277 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PMS1P54277 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PMS1P54277 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PMS1P54277 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PMS1P54277 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PMS1P54277 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PMS1P54277 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PMS1P54277 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PMS1P54277 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PMS1P54277 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.43■□□□□ 0.38
PMS1P54277 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PMS1P54277 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PMS1P54277 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.43■□□□□ 0.38
PMS1P54277 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PMS1P54277 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PMS1P54277 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.42■□□□□ 0.38
PMS1P54277 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.42■□□□□ 0.38
PMS1P54277 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PMS1P54277 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PMS1P54277 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.42■□□□□ 0.38
PMS1P54277 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PMS1P54277 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PMS1P54277 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.42■□□□□ 0.38
PMS1P54277 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PMS1P54277 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.42■□□□□ 0.38
PMS1P54277 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.42■□□□□ 0.38
PMS1P54277 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PMS1P54277 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PMS1P54277 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
PMS1P54277 SPDYE17-201ENST00000412399 783 ntBASIC17.42■□□□□ 0.38
PMS1P54277 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.42■□□□□ 0.38
PMS1P54277 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
PMS1P54277 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.42■□□□□ 0.38
PMS1P54277 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.42■□□□□ 0.38
PMS1P54277 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.42■□□□□ 0.38
PMS1P54277 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.42■□□□□ 0.38
PMS1P54277 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.42■□□□□ 0.38
PMS1P54277 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PMS1P54277 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.42■□□□□ 0.38
PMS1P54277 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.42■□□□□ 0.38
PMS1P54277 MIR4453-201ENST00000584019 89 ntBASIC17.42■□□□□ 0.38
PMS1P54277 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PMS1P54277 RN7SL828P-201ENST00000607615 303 ntBASIC17.42■□□□□ 0.38
PMS1P54277 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PMS1P54277 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PMS1P54277 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PMS1P54277 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PMS1P54277 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PMS1P54277 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.42■□□□□ 0.38
PMS1P54277 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PMS1P54277 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PMS1P54277 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PMS1P54277 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.42■□□□□ 0.38
PMS1P54277 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PMS1P54277 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PMS1P54277 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.42■□□□□ 0.38
PMS1P54277 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PMS1P54277 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PMS1P54277 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PMS1P54277 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PMS1P54277 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PMS1P54277 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.42■□□□□ 0.38
PMS1P54277 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PMS1P54277 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PMS1P54277 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.42■□□□□ 0.38
PMS1P54277 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PMS1P54277 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms