Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 PDPK2P-202ENST00000562415 1191 ntBASIC14.63□□□□□ -0.07
SLC9A3P48764 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.63□□□□□ -0.07
SLC9A3P48764 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.63□□□□□ -0.07
SLC9A3P48764 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.63□□□□□ -0.07
SLC9A3P48764 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
SLC9A3P48764 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC9A3P48764 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC9A3P48764 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC9A3P48764 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC9A3P48764 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SLC9A3P48764 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC9A3P48764 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC9A3P48764 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC9A3P48764 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC9A3P48764 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC9A3P48764 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC9A3P48764 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC9A3P48764 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC9A3P48764 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SLC9A3P48764 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC9A3P48764 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.63□□□□□ -0.07
SLC9A3P48764 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC9A3P48764 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
SLC9A3P48764 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.62□□□□□ -0.07
SLC9A3P48764 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC9A3P48764 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.62□□□□□ -0.07
SLC9A3P48764 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC9A3P48764 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC9A3P48764 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC9A3P48764 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SLC9A3P48764 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.62□□□□□ -0.07
SLC9A3P48764 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.62□□□□□ -0.07
SLC9A3P48764 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.62□□□□□ -0.07
SLC9A3P48764 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC9A3P48764 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.62□□□□□ -0.07
SLC9A3P48764 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC9A3P48764 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC9A3P48764 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC9A3P48764 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC9A3P48764 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC9A3P48764 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC9A3P48764 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC9A3P48764 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC9A3P48764 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC9A3P48764 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SLC9A3P48764 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC9A3P48764 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
SLC9A3P48764 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SLC9A3P48764 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.62□□□□□ -0.07
SLC9A3P48764 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.62□□□□□ -0.07
SLC9A3P48764 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.62□□□□□ -0.07
SLC9A3P48764 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.62□□□□□ -0.07
SLC9A3P48764 AC112191.1-201ENST00000523689 701 ntBASIC14.62□□□□□ -0.07
SLC9A3P48764 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SLC9A3P48764 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.62□□□□□ -0.07
SLC9A3P48764 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.62□□□□□ -0.07
SLC9A3P48764 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
SLC9A3P48764 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.62□□□□□ -0.07
SLC9A3P48764 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.62□□□□□ -0.07
SLC9A3P48764 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SLC9A3P48764 TMBIM7P-203ENST00000641617 1718 ntBASIC14.62□□□□□ -0.07
SLC9A3P48764 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC9A3P48764 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC9A3P48764 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SLC9A3P48764 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SLC9A3P48764 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC9A3P48764 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SLC9A3P48764 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC9A3P48764 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC9A3P48764 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC9A3P48764 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SLC9A3P48764 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC9A3P48764 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.62□□□□□ -0.07
SLC9A3P48764 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC9A3P48764 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC9A3P48764 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.61□□□□□ -0.07
SLC9A3P48764 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC9A3P48764 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.61□□□□□ -0.07
SLC9A3P48764 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.61□□□□□ -0.07
SLC9A3P48764 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SLC9A3P48764 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.61□□□□□ -0.07
SLC9A3P48764 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC9A3P48764 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.61□□□□□ -0.07
SLC9A3P48764 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC9A3P48764 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.61□□□□□ -0.07
SLC9A3P48764 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
SLC9A3P48764 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SLC9A3P48764 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.61□□□□□ -0.07
SLC9A3P48764 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC9A3P48764 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.61□□□□□ -0.07
SLC9A3P48764 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC9A3P48764 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.61□□□□□ -0.07
SLC9A3P48764 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SLC9A3P48764 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SLC9A3P48764 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC9A3P48764 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.61□□□□□ -0.07
SLC9A3P48764 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.61□□□□□ -0.07
SLC9A3P48764 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.61□□□□□ -0.07
SLC9A3P48764 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.61□□□□□ -0.07
SLC9A3P48764 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms