Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1A1P48729 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1A1P48729 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1A1P48729 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
CSNK1A1P48729 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CSNK1A1P48729 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1A1P48729 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1A1P48729 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1A1P48729 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.15□□□□□ -0.14
CSNK1A1P48729 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.15□□□□□ -0.14
CSNK1A1P48729 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
CSNK1A1P48729 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.15□□□□□ -0.14
CSNK1A1P48729 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.15□□□□□ -0.14
CSNK1A1P48729 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CSNK1A1P48729 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1A1P48729 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1A1P48729 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1A1P48729 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1A1P48729 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1A1P48729 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1A1P48729 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CSNK1A1P48729 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.14□□□□□ -0.15
CSNK1A1P48729 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1A1P48729 AC105917.1-201ENST00000506637 2539 ntBASIC14.14□□□□□ -0.15
CSNK1A1P48729 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1A1P48729 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.14□□□□□ -0.15
CSNK1A1P48729 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1A1P48729 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.14□□□□□ -0.15
CSNK1A1P48729 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1A1P48729 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1A1P48729 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.14□□□□□ -0.15
CSNK1A1P48729 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CSNK1A1P48729 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1A1P48729 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1A1P48729 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1A1P48729 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1A1P48729 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.14□□□□□ -0.15
CSNK1A1P48729 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1A1P48729 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CSNK1A1P48729 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.14□□□□□ -0.15
CSNK1A1P48729 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
CSNK1A1P48729 AC018892.3-201ENST00000623986 2499 ntBASIC14.14□□□□□ -0.15
CSNK1A1P48729 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1A1P48729 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.14□□□□□ -0.15
CSNK1A1P48729 AL139400.1-201ENST00000366220 510 ntBASIC14.14□□□□□ -0.15
CSNK1A1P48729 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1A1P48729 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CSNK1A1P48729 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1A1P48729 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1A1P48729 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
CSNK1A1P48729 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.14□□□□□ -0.15
CSNK1A1P48729 PHKG1P2-201ENST00000457537 863 ntBASIC14.14□□□□□ -0.15
CSNK1A1P48729 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.14□□□□□ -0.15
CSNK1A1P48729 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1A1P48729 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.14□□□□□ -0.15
CSNK1A1P48729 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.14□□□□□ -0.15
CSNK1A1P48729 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1A1P48729 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.14□□□□□ -0.15
CSNK1A1P48729 Z92544.3-201ENST00000624747 417 ntBASIC14.14□□□□□ -0.15
CSNK1A1P48729 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1A1P48729 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1A1P48729 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1A1P48729 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.14□□□□□ -0.15
CSNK1A1P48729 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1A1P48729 CETN4P-206ENST00000642099 2168 ntBASIC14.14□□□□□ -0.15
CSNK1A1P48729 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1A1P48729 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1A1P48729 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1A1P48729 PCDHA3-202ENST00000532566 4594 ntBASIC14.14□□□□□ -0.15
CSNK1A1P48729 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.14□□□□□ -0.15
CSNK1A1P48729 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.14□□□□□ -0.15
CSNK1A1P48729 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.14□□□□□ -0.15
CSNK1A1P48729 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1A1P48729 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1A1P48729 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1A1P48729 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1A1P48729 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.14□□□□□ -0.15
CSNK1A1P48729 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1A1P48729 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.14□□□□□ -0.15
CSNK1A1P48729 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1A1P48729 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK1A1P48729 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CSNK1A1P48729 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK1A1P48729 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK1A1P48729 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
CSNK1A1P48729 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.13□□□□□ -0.15
CSNK1A1P48729 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK1A1P48729 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CSNK1A1P48729 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CSNK1A1P48729 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CSNK1A1P48729 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.13□□□□□ -0.15
CSNK1A1P48729 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK1A1P48729 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.13□□□□□ -0.15
CSNK1A1P48729 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK1A1P48729 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CSNK1A1P48729 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.13□□□□□ -0.15
CSNK1A1P48729 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK1A1P48729 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK1A1P48729 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK1A1P48729 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms