Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GDNFP39905 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
GDNFP39905 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
GDNFP39905 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
GDNFP39905 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
GDNFP39905 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
GDNFP39905 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GDNFP39905 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
GDNFP39905 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.9□□□□□ -0.18
GDNFP39905 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GDNFP39905 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.9□□□□□ -0.18
GDNFP39905 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GDNFP39905 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.9□□□□□ -0.18
GDNFP39905 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GDNFP39905 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
GDNFP39905 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GDNFP39905 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
GDNFP39905 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GDNFP39905 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GDNFP39905 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GDNFP39905 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GDNFP39905 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
GDNFP39905 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GDNFP39905 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GDNFP39905 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GDNFP39905 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GDNFP39905 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.89□□□□□ -0.19
GDNFP39905 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
GDNFP39905 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.89□□□□□ -0.19
GDNFP39905 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GDNFP39905 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GDNFP39905 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
GDNFP39905 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GDNFP39905 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GDNFP39905 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
GDNFP39905 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
GDNFP39905 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.89□□□□□ -0.19
GDNFP39905 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.89□□□□□ -0.19
GDNFP39905 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.89□□□□□ -0.19
GDNFP39905 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.89□□□□□ -0.19
GDNFP39905 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.89□□□□□ -0.19
GDNFP39905 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
GDNFP39905 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.89□□□□□ -0.19
GDNFP39905 AL662844.1-201ENST00000546340 181 ntBASIC13.89□□□□□ -0.19
GDNFP39905 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.89□□□□□ -0.19
GDNFP39905 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.89□□□□□ -0.19
GDNFP39905 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.89□□□□□ -0.19
GDNFP39905 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.89□□□□□ -0.19
GDNFP39905 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.89□□□□□ -0.19
GDNFP39905 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.89□□□□□ -0.19
GDNFP39905 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GDNFP39905 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
GDNFP39905 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GDNFP39905 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GDNFP39905 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.89□□□□□ -0.19
GDNFP39905 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
GDNFP39905 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
GDNFP39905 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
GDNFP39905 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.88□□□□□ -0.19
GDNFP39905 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GDNFP39905 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GDNFP39905 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.88□□□□□ -0.19
GDNFP39905 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
GDNFP39905 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
GDNFP39905 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GDNFP39905 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GDNFP39905 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.88□□□□□ -0.19
GDNFP39905 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GDNFP39905 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.88□□□□□ -0.19
GDNFP39905 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
GDNFP39905 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
GDNFP39905 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.88□□□□□ -0.19
GDNFP39905 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GDNFP39905 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
GDNFP39905 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.88□□□□□ -0.19
GDNFP39905 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GDNFP39905 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GDNFP39905 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.88□□□□□ -0.19
GDNFP39905 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
GDNFP39905 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GDNFP39905 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GDNFP39905 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.88□□□□□ -0.19
GDNFP39905 PMS2P1-201ENST00000431037 1228 ntBASIC13.88□□□□□ -0.19
GDNFP39905 FDX1P1-201ENST00000449115 551 ntBASIC13.88□□□□□ -0.19
GDNFP39905 AC108751.1-201ENST00000490852 363 ntBASIC13.88□□□□□ -0.19
GDNFP39905 AC079776.4-201ENST00000511039 504 ntBASIC13.88□□□□□ -0.19
GDNFP39905 UNC93B6-202ENST00000528242 690 ntBASIC13.88□□□□□ -0.19
GDNFP39905 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.88□□□□□ -0.19
GDNFP39905 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GDNFP39905 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
GDNFP39905 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GDNFP39905 GGTLC5P-201ENST00000617623 998 ntBASIC13.88□□□□□ -0.19
GDNFP39905 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.88□□□□□ -0.19
GDNFP39905 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.88□□□□□ -0.19
GDNFP39905 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
GDNFP39905 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.88□□□□□ -0.19
GDNFP39905 U82695.1-201ENST00000635752 1889 ntBASIC13.88□□□□□ -0.19
GDNFP39905 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
GDNFP39905 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GDNFP39905 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms