Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC18.12■□□□□ 0.49
CLCN1P35523 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC18.12■□□□□ 0.49
CLCN1P35523 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC18.12■□□□□ 0.49
CLCN1P35523 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN1P35523 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN1P35523 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN1P35523 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN1P35523 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN1P35523 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC18.12■□□□□ 0.49
CLCN1P35523 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CLCN1P35523 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN1P35523 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.12■□□□□ 0.49
CLCN1P35523 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CLCN1P35523 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.12■□□□□ 0.49
CLCN1P35523 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
CLCN1P35523 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN1P35523 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CLCN1P35523 PI4KAP1-204ENST00000612579 1703 ntBASIC18.12■□□□□ 0.49
CLCN1P35523 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.12■□□□□ 0.49
CLCN1P35523 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN1P35523 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN1P35523 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC18.12■□□□□ 0.49
CLCN1P35523 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN1P35523 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN1P35523 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN1P35523 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN1P35523 TKT-201ENST00000296289 1931 ntTSL 5 BASIC18.11■□□□□ 0.49
CLCN1P35523 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN1P35523 AC105250.1-201ENST00000509378 2057 ntBASIC18.11■□□□□ 0.49
CLCN1P35523 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC18.11■□□□□ 0.49
CLCN1P35523 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN1P35523 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC18.11■□□□□ 0.49
CLCN1P35523 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC18.11■□□□□ 0.49
CLCN1P35523 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
CLCN1P35523 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN1P35523 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN1P35523 AL450487.1-201ENST00000426799 995 ntBASIC18.11■□□□□ 0.49
CLCN1P35523 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.11■□□□□ 0.49
CLCN1P35523 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.11■□□□□ 0.49
CLCN1P35523 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.11■□□□□ 0.49
CLCN1P35523 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.11■□□□□ 0.49
CLCN1P35523 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
CLCN1P35523 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.11■□□□□ 0.49
CLCN1P35523 AC104692.2-201ENST00000603054 253 ntBASIC18.11■□□□□ 0.49
CLCN1P35523 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.11■□□□□ 0.49
CLCN1P35523 REXO1L3P-201ENST00000622202 1288 ntBASIC18.11■□□□□ 0.49
CLCN1P35523 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.11■□□□□ 0.49
CLCN1P35523 AF228730.7-201ENST00000641842 219 ntBASIC18.11■□□□□ 0.49
CLCN1P35523 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.11■□□□□ 0.49
CLCN1P35523 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN1P35523 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC18.11■□□□□ 0.49
CLCN1P35523 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN1P35523 AC006277.1-201ENST00000624348 1610 ntBASIC18.11■□□□□ 0.49
CLCN1P35523 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.11■□□□□ 0.49
CLCN1P35523 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN1P35523 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC18.11■□□□□ 0.49
CLCN1P35523 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN1P35523 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN1P35523 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN1P35523 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN1P35523 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN1P35523 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN1P35523 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CLCN1P35523 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN1P35523 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN1P35523 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN1P35523 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC18.1■□□□□ 0.49
CLCN1P35523 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN1P35523 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC18.1■□□□□ 0.49
CLCN1P35523 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN1P35523 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CLCN1P35523 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.1■□□□□ 0.49
CLCN1P35523 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.1■□□□□ 0.49
CLCN1P35523 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN1P35523 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.1■□□□□ 0.49
CLCN1P35523 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN1P35523 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN1P35523 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.1■□□□□ 0.49
CLCN1P35523 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.1■□□□□ 0.49
CLCN1P35523 SLC25A6P2-201ENST00000497974 877 ntBASIC18.1■□□□□ 0.49
CLCN1P35523 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CLCN1P35523 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CLCN1P35523 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.1■□□□□ 0.49
CLCN1P35523 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN1P35523 AL031008.1-201ENST00000619963 541 ntBASIC18.1■□□□□ 0.49
CLCN1P35523 AC008735.5-201ENST00000623544 497 ntBASIC18.1■□□□□ 0.49
CLCN1P35523 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
CLCN1P35523 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN1P35523 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN1P35523 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN1P35523 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN1P35523 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN1P35523 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CLCN1P35523 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CLCN1P35523 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN1P35523 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN1P35523 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC18.1■□□□□ 0.49
CLCN1P35523 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN1P35523 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CLCN1P35523 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms