Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFC1P35251 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.74■□□□□ 0.27
RFC1P35251 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RFC1P35251 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFC1P35251 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
RFC1P35251 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFC1P35251 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFC1P35251 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
RFC1P35251 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.74■□□□□ 0.27
RFC1P35251 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RFC1P35251 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.74■□□□□ 0.27
RFC1P35251 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFC1P35251 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RFC1P35251 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFC1P35251 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFC1P35251 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFC1P35251 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RFC1P35251 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFC1P35251 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RFC1P35251 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFC1P35251 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RFC1P35251 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFC1P35251 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFC1P35251 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.73■□□□□ 0.27
RFC1P35251 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.73■□□□□ 0.27
RFC1P35251 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.73■□□□□ 0.27
RFC1P35251 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RFC1P35251 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFC1P35251 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFC1P35251 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RFC1P35251 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
RFC1P35251 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RFC1P35251 SPDYE17-201ENST00000412399 783 ntBASIC16.73■□□□□ 0.27
RFC1P35251 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.73■□□□□ 0.27
RFC1P35251 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
RFC1P35251 SPDYE7P-202ENST00000420373 878 ntBASIC16.73■□□□□ 0.27
RFC1P35251 TSEN15P1-201ENST00000423257 515 ntBASIC16.73■□□□□ 0.27
RFC1P35251 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.73■□□□□ 0.27
RFC1P35251 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.73■□□□□ 0.27
RFC1P35251 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.73■□□□□ 0.27
RFC1P35251 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.73■□□□□ 0.27
RFC1P35251 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RFC1P35251 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFC1P35251 AC069262.1-201ENST00000539058 672 ntBASIC16.73■□□□□ 0.27
RFC1P35251 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RFC1P35251 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
RFC1P35251 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
RFC1P35251 AP001160.2-201ENST00000596071 487 ntBASIC16.73■□□□□ 0.27
RFC1P35251 AC079781.4-201ENST00000641908 219 ntBASIC16.73■□□□□ 0.27
RFC1P35251 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.73■□□□□ 0.27
RFC1P35251 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFC1P35251 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.73■□□□□ 0.27
RFC1P35251 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFC1P35251 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.73■□□□□ 0.27
RFC1P35251 AL035456.1-201ENST00000456064 1369 ntBASIC16.73■□□□□ 0.27
RFC1P35251 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
RFC1P35251 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.73■□□□□ 0.27
RFC1P35251 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFC1P35251 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RFC1P35251 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFC1P35251 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFC1P35251 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFC1P35251 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFC1P35251 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.73■□□□□ 0.27
RFC1P35251 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
RFC1P35251 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.73■□□□□ 0.27
RFC1P35251 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RFC1P35251 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFC1P35251 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RFC1P35251 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RFC1P35251 AC092384.3-202ENST00000564646 2873 ntBASIC16.72■□□□□ 0.27
RFC1P35251 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.72■□□□□ 0.27
RFC1P35251 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFC1P35251 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RFC1P35251 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RFC1P35251 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.72■□□□□ 0.27
RFC1P35251 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFC1P35251 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.72■□□□□ 0.27
RFC1P35251 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.72■□□□□ 0.27
RFC1P35251 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFC1P35251 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
RFC1P35251 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFC1P35251 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RFC1P35251 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RFC1P35251 AZGP1P1-201ENST00000411909 902 ntBASIC16.72■□□□□ 0.27
RFC1P35251 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFC1P35251 MTND6P24-201ENST00000440466 518 ntBASIC16.72■□□□□ 0.27
RFC1P35251 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFC1P35251 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.72■□□□□ 0.27
RFC1P35251 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.72■□□□□ 0.27
RFC1P35251 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.72■□□□□ 0.27
RFC1P35251 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.72■□□□□ 0.27
RFC1P35251 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.72■□□□□ 0.27
RFC1P35251 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFC1P35251 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.72■□□□□ 0.27
RFC1P35251 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RFC1P35251 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFC1P35251 AL513477.1-201ENST00000602865 2407 ntBASIC16.72■□□□□ 0.27
RFC1P35251 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.72■□□□□ 0.27
RFC1P35251 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms