Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.14□□□□□ -0.15
CD40LGP29965 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.14□□□□□ -0.15
CD40LGP29965 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD40LGP29965 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD40LGP29965 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.14□□□□□ -0.15
CD40LGP29965 AC005332.1-201ENST00000577698 1310 ntBASIC14.14□□□□□ -0.15
CD40LGP29965 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD40LGP29965 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.14□□□□□ -0.15
CD40LGP29965 CR383656.2-201ENST00000548656 2254 ntBASIC14.13□□□□□ -0.15
CD40LGP29965 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.13□□□□□ -0.15
CD40LGP29965 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD40LGP29965 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD40LGP29965 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD40LGP29965 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD40LGP29965 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD40LGP29965 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
CD40LGP29965 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD40LGP29965 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.13□□□□□ -0.15
CD40LGP29965 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CD40LGP29965 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.13□□□□□ -0.15
CD40LGP29965 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.13□□□□□ -0.15
CD40LGP29965 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD40LGP29965 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD40LGP29965 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD40LGP29965 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD40LGP29965 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD40LGP29965 FAM8A3P-201ENST00000427218 844 ntBASIC14.13□□□□□ -0.15
CD40LGP29965 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD40LGP29965 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD40LGP29965 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.13□□□□□ -0.15
CD40LGP29965 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
CD40LGP29965 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD40LGP29965 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD40LGP29965 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CD40LGP29965 AC125634.1-201ENST00000438758 1403 ntBASIC14.13□□□□□ -0.15
CD40LGP29965 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.13□□□□□ -0.15
CD40LGP29965 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD40LGP29965 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD40LGP29965 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD40LGP29965 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD40LGP29965 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD40LGP29965 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD40LGP29965 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD40LGP29965 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD40LGP29965 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CD40LGP29965 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.13□□□□□ -0.15
CD40LGP29965 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD40LGP29965 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD40LGP29965 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CD40LGP29965 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD40LGP29965 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD40LGP29965 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD40LGP29965 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD40LGP29965 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD40LGP29965 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
CD40LGP29965 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD40LGP29965 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CD40LGP29965 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.12□□□□□ -0.15
CD40LGP29965 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD40LGP29965 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.12□□□□□ -0.15
CD40LGP29965 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD40LGP29965 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.12□□□□□ -0.15
CD40LGP29965 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD40LGP29965 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.12□□□□□ -0.15
CD40LGP29965 FAM86EP-206ENST00000510506 987 ntBASIC14.12□□□□□ -0.15
CD40LGP29965 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
CD40LGP29965 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.12□□□□□ -0.15
CD40LGP29965 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD40LGP29965 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.12□□□□□ -0.15
CD40LGP29965 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD40LGP29965 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD40LGP29965 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.12□□□□□ -0.15
CD40LGP29965 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD40LGP29965 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD40LGP29965 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD40LGP29965 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.12□□□□□ -0.15
CD40LGP29965 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.12□□□□□ -0.15
CD40LGP29965 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD40LGP29965 AC005622.1-201ENST00000636801 1703 ntBASIC14.12□□□□□ -0.15
CD40LGP29965 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.12□□□□□ -0.15
CD40LGP29965 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CD40LGP29965 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.12□□□□□ -0.15
CD40LGP29965 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD40LGP29965 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD40LGP29965 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD40LGP29965 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD40LGP29965 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CD40LGP29965 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.12□□□□□ -0.15
CD40LGP29965 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD40LGP29965 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD40LGP29965 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CD40LGP29965 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40LGP29965 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40LGP29965 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40LGP29965 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40LGP29965 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CD40LGP29965 AC243591.1-201ENST00000452967 1364 ntBASIC14.11□□□□□ -0.15
CD40LGP29965 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CD40LGP29965 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CD40LGP29965 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms