Protein–RNA interactions for Protein: P21359

NF1, Neurofibromin, humanhuman

Predictions only

Length 2,839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P21359 BNIP3P13-201ENST00000599968 566 ntBASIC12.61□□□□□ -0.39
NF1P21359 AL161773.1-201ENST00000624845 863 ntBASIC12.61□□□□□ -0.39
NF1P21359 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
NF1P21359 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC12.61□□□□□ -0.39
NF1P21359 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NF1P21359 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NF1P21359 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC12.61□□□□□ -0.39
NF1P21359 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
NF1P21359 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NF1P21359 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NF1P21359 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC12.61□□□□□ -0.39
NF1P21359 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NF1P21359 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
NF1P21359 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NF1P21359 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NF1P21359 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NF1P21359 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NF1P21359 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
NF1P21359 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
NF1P21359 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC12.61□□□□□ -0.39
NF1P21359 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC12.61□□□□□ -0.39
NF1P21359 AL031713.1-201ENST00000564813 661 ntBASIC12.61□□□□□ -0.39
NF1P21359 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC12.61□□□□□ -0.39
NF1P21359 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NF1P21359 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NF1P21359 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NF1P21359 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
NF1P21359 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NF1P21359 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NF1P21359 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NF1P21359 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.61□□□□□ -0.39
NF1P21359 VILL-207ENST00000465644 1857 ntTSL 5 BASIC12.61□□□□□ -0.39
NF1P21359 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NF1P21359 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NF1P21359 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NF1P21359 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC12.61□□□□□ -0.39
NF1P21359 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC12.61□□□□□ -0.39
NF1P21359 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC12.61□□□□□ -0.39
NF1P21359 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
NF1P21359 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NF1P21359 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NF1P21359 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NF1P21359 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC12.61□□□□□ -0.39
NF1P21359 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC12.61□□□□□ -0.39
NF1P21359 AC243562.2-201ENST00000561247 970 ntBASIC12.61□□□□□ -0.39
NF1P21359 AC004923.1-202ENST00000642106 209 ntBASIC12.61□□□□□ -0.39
NF1P21359 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NF1P21359 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
NF1P21359 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.6□□□□□ -0.39
NF1P21359 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NF1P21359 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NF1P21359 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
NF1P21359 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.6□□□□□ -0.39
NF1P21359 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NF1P21359 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC12.6□□□□□ -0.39
NF1P21359 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NF1P21359 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NF1P21359 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NF1P21359 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NF1P21359 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC12.6□□□□□ -0.39
NF1P21359 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
NF1P21359 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NF1P21359 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
NF1P21359 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC12.6□□□□□ -0.39
NF1P21359 RN7SL846P-201ENST00000467429 292 ntBASIC12.6□□□□□ -0.39
NF1P21359 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
NF1P21359 TMCO5B-205ENST00000530020 894 ntBASIC12.6□□□□□ -0.39
NF1P21359 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.6□□□□□ -0.39
NF1P21359 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NF1P21359 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC12.6□□□□□ -0.39
NF1P21359 AC020922.3-201ENST00000595064 547 ntBASIC12.6□□□□□ -0.39
NF1P21359 AC011247.3-201ENST00000603297 438 ntBASIC12.6□□□□□ -0.39
NF1P21359 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
NF1P21359 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
NF1P21359 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
NF1P21359 REXO1L1P-202ENST00000608646 1974 ntBASIC12.6□□□□□ -0.39
NF1P21359 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
NF1P21359 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
NF1P21359 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NF1P21359 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC12.6□□□□□ -0.39
NF1P21359 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
NF1P21359 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NF1P21359 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
NF1P21359 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
NF1P21359 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
NF1P21359 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NF1P21359 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
NF1P21359 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
NF1P21359 MARK2P5-201ENST00000507649 634 ntBASIC12.6□□□□□ -0.39
NF1P21359 PMEL-214ENST00000550447 901 ntTSL 3 BASIC12.6□□□□□ -0.39
NF1P21359 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC12.6□□□□□ -0.39
NF1P21359 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NF1P21359 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC12.6□□□□□ -0.39
NF1P21359 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
NF1P21359 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
NF1P21359 GATB-213ENST00000515812 1893 ntTSL 5 BASIC12.6□□□□□ -0.39
NF1P21359 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
NF1P21359 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NF1P21359 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
NF1P21359 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms