Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.03■□□□□ 0.64
LMNB1P20700 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
LMNB1P20700 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.02■□□□□ 0.64
LMNB1P20700 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
LMNB1P20700 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.02■□□□□ 0.64
LMNB1P20700 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LMNB1P20700 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LMNB1P20700 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
LMNB1P20700 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LMNB1P20700 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC19.02■□□□□ 0.64
LMNB1P20700 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC19.02■□□□□ 0.64
LMNB1P20700 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LMNB1P20700 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LMNB1P20700 AC114501.1-201ENST00000445949 172 ntBASIC19.02■□□□□ 0.64
LMNB1P20700 POU5F1P6-201ENST00000466990 990 ntBASIC19.02■□□□□ 0.64
LMNB1P20700 GAPDHP40-201ENST00000505218 1006 ntBASIC19.02■□□□□ 0.64
LMNB1P20700 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC19.02■□□□□ 0.64
LMNB1P20700 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC19.02■□□□□ 0.64
LMNB1P20700 IQSEC3P1-201ENST00000538799 536 ntBASIC19.02■□□□□ 0.64
LMNB1P20700 RN7SL574P-201ENST00000581512 297 ntBASIC19.02■□□□□ 0.64
LMNB1P20700 AL133499.1-201ENST00000596207 608 ntBASIC19.02■□□□□ 0.64
LMNB1P20700 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC19.02■□□□□ 0.64
LMNB1P20700 AC091544.8-201ENST00000619490 361 ntBASIC19.02■□□□□ 0.64
LMNB1P20700 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
LMNB1P20700 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LMNB1P20700 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LMNB1P20700 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LMNB1P20700 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.02■□□□□ 0.64
LMNB1P20700 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LMNB1P20700 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
LMNB1P20700 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LMNB1P20700 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.02■□□□□ 0.63
LMNB1P20700 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
LMNB1P20700 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC19.02■□□□□ 0.63
LMNB1P20700 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMNB1P20700 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.01■□□□□ 0.63
LMNB1P20700 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMNB1P20700 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.01■□□□□ 0.63
LMNB1P20700 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMNB1P20700 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LMNB1P20700 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMNB1P20700 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMNB1P20700 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMNB1P20700 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.01■□□□□ 0.63
LMNB1P20700 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LMNB1P20700 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMNB1P20700 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMNB1P20700 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LMNB1P20700 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LMNB1P20700 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LMNB1P20700 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
LMNB1P20700 NDUFAB1P1-201ENST00000404262 460 ntBASIC19.01■□□□□ 0.63
LMNB1P20700 AC069218.1-201ENST00000435269 762 ntBASIC19.01■□□□□ 0.63
LMNB1P20700 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC19.01■□□□□ 0.63
LMNB1P20700 MSRA-203ENST00000441698 788 ntTSL 2 BASIC19.01■□□□□ 0.63
LMNB1P20700 AC104784.1-201ENST00000473096 294 ntBASIC19.01■□□□□ 0.63
LMNB1P20700 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC19.01■□□□□ 0.63
LMNB1P20700 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
LMNB1P20700 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC19.01■□□□□ 0.63
LMNB1P20700 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LMNB1P20700 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
LMNB1P20700 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC19.01■□□□□ 0.63
LMNB1P20700 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC19.01■□□□□ 0.63
LMNB1P20700 BX539320.1-201ENST00000623759 877 ntBASIC19.01■□□□□ 0.63
LMNB1P20700 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
LMNB1P20700 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.01■□□□□ 0.63
LMNB1P20700 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMNB1P20700 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LMNB1P20700 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMNB1P20700 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.01■□□□□ 0.63
LMNB1P20700 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMNB1P20700 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC19.01■□□□□ 0.63
LMNB1P20700 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LMNB1P20700 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMNB1P20700 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LMNB1P20700 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMNB1P20700 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.01■□□□□ 0.63
LMNB1P20700 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMNB1P20700 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.01■□□□□ 0.63
LMNB1P20700 AL138799.1-201ENST00000448213 1675 ntBASIC19.01■□□□□ 0.63
LMNB1P20700 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.01■□□□□ 0.63
LMNB1P20700 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19.01■□□□□ 0.63
LMNB1P20700 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMNB1P20700 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
LMNB1P20700 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
LMNB1P20700 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
LMNB1P20700 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LMNB1P20700 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC19■□□□□ 0.63
LMNB1P20700 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LMNB1P20700 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
LMNB1P20700 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LMNB1P20700 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LMNB1P20700 SMS-201ENST00000379404 1174 ntTSL 3 BASIC19■□□□□ 0.63
LMNB1P20700 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC19■□□□□ 0.63
LMNB1P20700 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
LMNB1P20700 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC19■□□□□ 0.63
LMNB1P20700 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC19■□□□□ 0.63
LMNB1P20700 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC19■□□□□ 0.63
LMNB1P20700 CMC2-214ENST00000565925 640 ntTSL 5 BASIC19■□□□□ 0.63
LMNB1P20700 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms