Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB4AP20338 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB4AP20338 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB4AP20338 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC12.25□□□□□ -0.45
RAB4AP20338 GGT4P-201ENST00000623672 1708 ntBASIC12.25□□□□□ -0.45
RAB4AP20338 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RAB4AP20338 AP003680.1-201ENST00000598970 3660 ntBASIC12.25□□□□□ -0.45
RAB4AP20338 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
RAB4AP20338 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC12.25□□□□□ -0.45
RAB4AP20338 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB4AP20338 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
RAB4AP20338 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.25□□□□□ -0.45
RAB4AP20338 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.25□□□□□ -0.45
RAB4AP20338 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB4AP20338 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB4AP20338 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.25□□□□□ -0.45
RAB4AP20338 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB4AP20338 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.25□□□□□ -0.45
RAB4AP20338 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.25□□□□□ -0.45
RAB4AP20338 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
RAB4AP20338 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB4AP20338 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC12.24□□□□□ -0.45
RAB4AP20338 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.24□□□□□ -0.45
RAB4AP20338 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.24□□□□□ -0.45
RAB4AP20338 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
RAB4AP20338 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB4AP20338 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RAB4AP20338 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB4AP20338 PRORSD1P-201ENST00000295112 541 ntBASIC12.24□□□□□ -0.45
RAB4AP20338 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB4AP20338 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
RAB4AP20338 MIR662-201ENST00000384847 95 ntBASIC12.24□□□□□ -0.45
RAB4AP20338 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB4AP20338 CRAT-202ENST00000393384 973 ntTSL 2 BASIC12.24□□□□□ -0.45
RAB4AP20338 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.24□□□□□ -0.45
RAB4AP20338 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
RAB4AP20338 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB4AP20338 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
RAB4AP20338 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB4AP20338 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC12.24□□□□□ -0.45
RAB4AP20338 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
RAB4AP20338 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.24□□□□□ -0.45
RAB4AP20338 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
RAB4AP20338 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB4AP20338 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RAB4AP20338 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC12.24□□□□□ -0.45
RAB4AP20338 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RAB4AP20338 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC12.24□□□□□ -0.45
RAB4AP20338 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.24□□□□□ -0.45
RAB4AP20338 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC12.24□□□□□ -0.45
RAB4AP20338 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
RAB4AP20338 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC12.24□□□□□ -0.45
RAB4AP20338 DUX4L17-201ENST00000557360 1267 ntBASIC12.24□□□□□ -0.45
RAB4AP20338 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.24□□□□□ -0.45
RAB4AP20338 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB4AP20338 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB4AP20338 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC12.24□□□□□ -0.45
RAB4AP20338 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB4AP20338 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC12.24□□□□□ -0.45
RAB4AP20338 AC015909.5-201ENST00000624336 2266 ntBASIC12.24□□□□□ -0.45
RAB4AP20338 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.24□□□□□ -0.45
RAB4AP20338 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC12.24□□□□□ -0.45
RAB4AP20338 AC079776.2-201ENST00000641154 1609 ntBASIC12.24□□□□□ -0.45
RAB4AP20338 AL139011.1-202ENST00000642063 584 ntBASIC12.24□□□□□ -0.45
RAB4AP20338 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB4AP20338 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB4AP20338 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB4AP20338 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB4AP20338 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.24□□□□□ -0.45
RAB4AP20338 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
RAB4AP20338 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.24□□□□□ -0.45
RAB4AP20338 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
RAB4AP20338 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.23□□□□□ -0.45
RAB4AP20338 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.23□□□□□ -0.45
RAB4AP20338 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
RAB4AP20338 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RAB4AP20338 SSR4P1-203ENST00000599569 2260 ntBASIC12.23□□□□□ -0.45
RAB4AP20338 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.23□□□□□ -0.45
RAB4AP20338 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RAB4AP20338 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB4AP20338 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.23□□□□□ -0.45
RAB4AP20338 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB4AP20338 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB4AP20338 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
RAB4AP20338 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RAB4AP20338 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB4AP20338 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB4AP20338 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB4AP20338 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC12.23□□□□□ -0.45
RAB4AP20338 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB4AP20338 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB4AP20338 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB4AP20338 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB4AP20338 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB4AP20338 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC12.23□□□□□ -0.45
RAB4AP20338 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
RAB4AP20338 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB4AP20338 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB4AP20338 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC12.23□□□□□ -0.45
RAB4AP20338 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms