Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC087481.3-201ENST00000602886 1894 ntBASIC16.14■□□□□ 0.17
NFKB1P19838 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NFKB1P19838 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NFKB1P19838 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NFKB1P19838 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NFKB1P19838 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.13■□□□□ 0.17
NFKB1P19838 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NFKB1P19838 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NFKB1P19838 AC104640.1-201ENST00000562617 2109 ntBASIC16.13■□□□□ 0.17
NFKB1P19838 AL607033.1-201ENST00000623900 1599 ntBASIC16.13■□□□□ 0.17
NFKB1P19838 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
NFKB1P19838 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.13■□□□□ 0.17
NFKB1P19838 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
NFKB1P19838 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NFKB1P19838 CETN4P-206ENST00000642099 2168 ntBASIC16.13■□□□□ 0.17
NFKB1P19838 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NFKB1P19838 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NFKB1P19838 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NFKB1P19838 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NFKB1P19838 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NFKB1P19838 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
NFKB1P19838 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NFKB1P19838 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NFKB1P19838 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.13■□□□□ 0.17
NFKB1P19838 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
NFKB1P19838 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
NFKB1P19838 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NFKB1P19838 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
NFKB1P19838 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
NFKB1P19838 AL080243.2-201ENST00000418783 582 ntBASIC16.13■□□□□ 0.17
NFKB1P19838 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.13■□□□□ 0.17
NFKB1P19838 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NFKB1P19838 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.13■□□□□ 0.17
NFKB1P19838 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.13■□□□□ 0.17
NFKB1P19838 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.13■□□□□ 0.17
NFKB1P19838 AC004449.1-201ENST00000564240 433 ntBASIC16.13■□□□□ 0.17
NFKB1P19838 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.13■□□□□ 0.17
NFKB1P19838 AC139530.3-201ENST00000620344 690 ntBASIC16.13■□□□□ 0.17
NFKB1P19838 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NFKB1P19838 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NFKB1P19838 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
NFKB1P19838 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
NFKB1P19838 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NFKB1P19838 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.13■□□□□ 0.17
NFKB1P19838 AC022532.1-201ENST00000624563 1728 ntBASIC16.13■□□□□ 0.17
NFKB1P19838 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
NFKB1P19838 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
NFKB1P19838 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.13■□□□□ 0.17
NFKB1P19838 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NFKB1P19838 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.13■□□□□ 0.17
NFKB1P19838 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NFKB1P19838 AC127383.1-201ENST00000444697 1800 ntBASIC16.12■□□□□ 0.17
NFKB1P19838 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NFKB1P19838 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.12■□□□□ 0.17
NFKB1P19838 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NFKB1P19838 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NFKB1P19838 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NFKB1P19838 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NFKB1P19838 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NFKB1P19838 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NFKB1P19838 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NFKB1P19838 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
NFKB1P19838 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.12■□□□□ 0.17
NFKB1P19838 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NFKB1P19838 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.12■□□□□ 0.17
NFKB1P19838 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NFKB1P19838 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.12■□□□□ 0.17
NFKB1P19838 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.12■□□□□ 0.17
NFKB1P19838 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NFKB1P19838 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NFKB1P19838 FO393414.2-201ENST00000405153 598 ntBASIC16.12■□□□□ 0.17
NFKB1P19838 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
NFKB1P19838 AC136604.1-201ENST00000418535 575 ntBASIC16.12■□□□□ 0.17
NFKB1P19838 CNN2P2-201ENST00000443536 909 ntBASIC16.12■□□□□ 0.17
NFKB1P19838 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NFKB1P19838 CNN2P3-201ENST00000450201 906 ntBASIC16.12■□□□□ 0.17
NFKB1P19838 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.12■□□□□ 0.17
NFKB1P19838 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.12■□□□□ 0.17
NFKB1P19838 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.12■□□□□ 0.17
NFKB1P19838 AL136317.3-201ENST00000618497 906 ntBASIC16.12■□□□□ 0.17
NFKB1P19838 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NFKB1P19838 AC144831.1-201ENST00000573312 2656 ntBASIC16.12■□□□□ 0.17
NFKB1P19838 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.12■□□□□ 0.17
NFKB1P19838 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NFKB1P19838 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NFKB1P19838 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.12■□□□□ 0.17
NFKB1P19838 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
NFKB1P19838 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.12■□□□□ 0.17
NFKB1P19838 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NFKB1P19838 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
NFKB1P19838 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
NFKB1P19838 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NFKB1P19838 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NFKB1P19838 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NFKB1P19838 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NFKB1P19838 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NFKB1P19838 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
NFKB1P19838 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NFKB1P19838 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.12■□□□□ 0.17
NFKB1P19838 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms