Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H1DP16402 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H1DP16402 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
HIST1H1DP16402 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.5□□□□□ -0.25
HIST1H1DP16402 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.5□□□□□ -0.25
HIST1H1DP16402 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.5□□□□□ -0.25
HIST1H1DP16402 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.5□□□□□ -0.25
HIST1H1DP16402 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
HIST1H1DP16402 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H1DP16402 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.5□□□□□ -0.25
HIST1H1DP16402 AC023141.13-201ENST00000604991 943 ntBASIC13.5□□□□□ -0.25
HIST1H1DP16402 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
HIST1H1DP16402 AC012313.10-201ENST00000623509 926 ntBASIC13.5□□□□□ -0.25
HIST1H1DP16402 AC148477.8-201ENST00000624298 468 ntBASIC13.5□□□□□ -0.25
HIST1H1DP16402 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.5□□□□□ -0.25
HIST1H1DP16402 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
HIST1H1DP16402 AC007064.4-201ENST00000637740 555 ntBASIC13.5□□□□□ -0.25
HIST1H1DP16402 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H1DP16402 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H1DP16402 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H1DP16402 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.5□□□□□ -0.25
HIST1H1DP16402 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H1DP16402 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
HIST1H1DP16402 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.5□□□□□ -0.25
HIST1H1DP16402 AC148477.4-201ENST00000613430 1793 ntBASIC13.5□□□□□ -0.25
HIST1H1DP16402 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H1DP16402 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H1DP16402 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H1DP16402 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H1DP16402 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
HIST1H1DP16402 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H1DP16402 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.49□□□□□ -0.25
HIST1H1DP16402 MROH4P-201ENST00000431302 1578 ntBASIC13.49□□□□□ -0.25
HIST1H1DP16402 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.49□□□□□ -0.25
HIST1H1DP16402 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
HIST1H1DP16402 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H1DP16402 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.49□□□□□ -0.25
HIST1H1DP16402 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.49□□□□□ -0.25
HIST1H1DP16402 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.49□□□□□ -0.25
HIST1H1DP16402 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H1DP16402 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
HIST1H1DP16402 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H1DP16402 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H1DP16402 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.49□□□□□ -0.25
HIST1H1DP16402 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.49□□□□□ -0.25
HIST1H1DP16402 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.49□□□□□ -0.25
HIST1H1DP16402 AL645939.2-201ENST00000427340 991 ntBASIC13.49□□□□□ -0.25
HIST1H1DP16402 UNC93B6-202ENST00000528242 690 ntBASIC13.49□□□□□ -0.25
HIST1H1DP16402 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.49□□□□□ -0.25
HIST1H1DP16402 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.49□□□□□ -0.25
HIST1H1DP16402 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H1DP16402 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.49□□□□□ -0.25
HIST1H1DP16402 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
HIST1H1DP16402 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.49□□□□□ -0.25
HIST1H1DP16402 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
HIST1H1DP16402 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H1DP16402 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
HIST1H1DP16402 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H1DP16402 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H1DP16402 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H1DP16402 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H1DP16402 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
HIST1H1DP16402 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H1DP16402 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H1DP16402 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H1DP16402 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H1DP16402 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.49□□□□□ -0.25
HIST1H1DP16402 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H1DP16402 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
HIST1H1DP16402 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
HIST1H1DP16402 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
HIST1H1DP16402 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H1DP16402 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H1DP16402 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H1DP16402 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.48□□□□□ -0.25
HIST1H1DP16402 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.48□□□□□ -0.25
HIST1H1DP16402 AC026748.1-201ENST00000624349 3251 ntBASIC13.48□□□□□ -0.25
HIST1H1DP16402 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H1DP16402 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.48□□□□□ -0.25
HIST1H1DP16402 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.48□□□□□ -0.25
HIST1H1DP16402 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H1DP16402 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H1DP16402 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.48□□□□□ -0.25
HIST1H1DP16402 AL390755.1-201ENST00000623716 2027 ntBASIC13.48□□□□□ -0.25
HIST1H1DP16402 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H1DP16402 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
HIST1H1DP16402 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H1DP16402 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.48□□□□□ -0.25
HIST1H1DP16402 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.48□□□□□ -0.25
HIST1H1DP16402 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.48□□□□□ -0.25
HIST1H1DP16402 AC098831.1-202ENST00000438821 336 ntBASIC13.48□□□□□ -0.25
HIST1H1DP16402 AC009947.1-201ENST00000444350 727 ntBASIC13.48□□□□□ -0.25
HIST1H1DP16402 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.48□□□□□ -0.25
HIST1H1DP16402 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.48□□□□□ -0.25
HIST1H1DP16402 AC024267.1-201ENST00000582320 895 ntBASIC13.48□□□□□ -0.25
HIST1H1DP16402 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
HIST1H1DP16402 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.48□□□□□ -0.25
HIST1H1DP16402 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
HIST1H1DP16402 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H1DP16402 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms