Protein–RNA interactions for Protein: P16035

TIMP2, Metalloproteinase inhibitor 2, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2P16035 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TIMP2P16035 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TIMP2P16035 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.75■□□□□ 0.11
TIMP2P16035 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TIMP2P16035 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TIMP2P16035 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TIMP2P16035 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TIMP2P16035 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TIMP2P16035 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TIMP2P16035 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TIMP2P16035 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TIMP2P16035 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.74■□□□□ 0.11
TIMP2P16035 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TIMP2P16035 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.74■□□□□ 0.11
TIMP2P16035 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TIMP2P16035 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
TIMP2P16035 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
TIMP2P16035 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TIMP2P16035 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TIMP2P16035 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TIMP2P16035 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TIMP2P16035 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TIMP2P16035 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TIMP2P16035 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TIMP2P16035 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.74■□□□□ 0.11
TIMP2P16035 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.74■□□□□ 0.11
TIMP2P16035 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.74■□□□□ 0.11
TIMP2P16035 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.74■□□□□ 0.11
TIMP2P16035 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.74■□□□□ 0.11
TIMP2P16035 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.74■□□□□ 0.11
TIMP2P16035 WFDC1-204ENST00000613603 549 ntBASIC15.74■□□□□ 0.11
TIMP2P16035 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.74■□□□□ 0.11
TIMP2P16035 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.74■□□□□ 0.11
TIMP2P16035 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TIMP2P16035 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TIMP2P16035 CU639417.3-201ENST00000624240 1404 ntBASIC15.74■□□□□ 0.11
TIMP2P16035 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TIMP2P16035 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TIMP2P16035 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TIMP2P16035 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.74■□□□□ 0.11
TIMP2P16035 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TIMP2P16035 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.74■□□□□ 0.11
TIMP2P16035 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
TIMP2P16035 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TIMP2P16035 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
TIMP2P16035 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TIMP2P16035 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
TIMP2P16035 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP2P16035 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.73■□□□□ 0.11
TIMP2P16035 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP2P16035 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP2P16035 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.73■□□□□ 0.11
TIMP2P16035 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP2P16035 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP2P16035 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TIMP2P16035 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.73■□□□□ 0.11
TIMP2P16035 AL365203.3-201ENST00000609742 2057 ntBASIC15.73■□□□□ 0.11
TIMP2P16035 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TIMP2P16035 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TIMP2P16035 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TIMP2P16035 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
TIMP2P16035 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.73■□□□□ 0.11
TIMP2P16035 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.73■□□□□ 0.11
TIMP2P16035 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.73■□□□□ 0.11
TIMP2P16035 RN7SL752P-201ENST00000463779 287 ntBASIC15.73■□□□□ 0.11
TIMP2P16035 KRT18P43-201ENST00000469825 1281 ntBASIC15.73■□□□□ 0.11
TIMP2P16035 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.73■□□□□ 0.11
TIMP2P16035 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.73■□□□□ 0.11
TIMP2P16035 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP2P16035 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP2P16035 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TIMP2P16035 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.73■□□□□ 0.11
TIMP2P16035 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TIMP2P16035 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.73■□□□□ 0.11
TIMP2P16035 AC000095.1-201ENST00000603208 874 ntBASIC15.73■□□□□ 0.11
TIMP2P16035 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP2P16035 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP2P16035 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.73■□□□□ 0.11
TIMP2P16035 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TIMP2P16035 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.73■□□□□ 0.11
TIMP2P16035 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP2P16035 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP2P16035 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.73■□□□□ 0.11
TIMP2P16035 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TIMP2P16035 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP2P16035 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.73■□□□□ 0.11
TIMP2P16035 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TIMP2P16035 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP2P16035 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP2P16035 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP2P16035 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMP2P16035 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TIMP2P16035 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TIMP2P16035 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TIMP2P16035 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TIMP2P16035 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMP2P16035 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMP2P16035 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMP2P16035 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMP2P16035 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms