Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
DEFA4P12838 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC12.98□□□□□ -0.33
DEFA4P12838 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
DEFA4P12838 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
DEFA4P12838 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.98□□□□□ -0.33
DEFA4P12838 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
DEFA4P12838 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
DEFA4P12838 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
DEFA4P12838 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
DEFA4P12838 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
DEFA4P12838 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC12.98□□□□□ -0.33
DEFA4P12838 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
DEFA4P12838 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
DEFA4P12838 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC12.98□□□□□ -0.33
DEFA4P12838 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
DEFA4P12838 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
DEFA4P12838 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.98□□□□□ -0.33
DEFA4P12838 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
DEFA4P12838 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
DEFA4P12838 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
DEFA4P12838 IGLL3P-201ENST00000412472 434 ntBASIC12.98□□□□□ -0.33
DEFA4P12838 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
DEFA4P12838 RPL13AP23-201ENST00000480739 586 ntBASIC12.98□□□□□ -0.33
DEFA4P12838 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC12.98□□□□□ -0.33
DEFA4P12838 RNA5SP419-201ENST00000515908 135 ntBASIC12.98□□□□□ -0.33
DEFA4P12838 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.98□□□□□ -0.33
DEFA4P12838 MAL2-202ENST00000531508 892 ntTSL 3 BASIC12.98□□□□□ -0.33
DEFA4P12838 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC12.98□□□□□ -0.33
DEFA4P12838 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.98□□□□□ -0.33
DEFA4P12838 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.98□□□□□ -0.33
DEFA4P12838 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.98□□□□□ -0.33
DEFA4P12838 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
DEFA4P12838 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.98□□□□□ -0.33
DEFA4P12838 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
DEFA4P12838 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC12.98□□□□□ -0.33
DEFA4P12838 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
DEFA4P12838 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
DEFA4P12838 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
DEFA4P12838 AC023157.3-201ENST00000619086 2088 ntBASIC12.98□□□□□ -0.33
DEFA4P12838 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
DEFA4P12838 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
DEFA4P12838 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.98□□□□□ -0.33
DEFA4P12838 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
DEFA4P12838 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
DEFA4P12838 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC12.98□□□□□ -0.33
DEFA4P12838 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
DEFA4P12838 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.98□□□□□ -0.33
DEFA4P12838 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.98□□□□□ -0.33
DEFA4P12838 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
DEFA4P12838 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC12.98□□□□□ -0.33
DEFA4P12838 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
DEFA4P12838 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.97□□□□□ -0.33
DEFA4P12838 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DEFA4P12838 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DEFA4P12838 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
DEFA4P12838 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DEFA4P12838 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DEFA4P12838 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DEFA4P12838 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
DEFA4P12838 AC069224.1-201ENST00000566372 1715 ntBASIC12.97□□□□□ -0.33
DEFA4P12838 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
DEFA4P12838 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
DEFA4P12838 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
DEFA4P12838 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DEFA4P12838 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DEFA4P12838 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
DEFA4P12838 AL590627.1-203ENST00000421194 1026 ntBASIC12.97□□□□□ -0.33
DEFA4P12838 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
DEFA4P12838 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.97□□□□□ -0.33
DEFA4P12838 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
DEFA4P12838 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.97□□□□□ -0.33
DEFA4P12838 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC12.97□□□□□ -0.33
DEFA4P12838 AC064836.3-201ENST00000607928 673 ntBASIC12.97□□□□□ -0.33
DEFA4P12838 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
DEFA4P12838 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
DEFA4P12838 AC004877.2-201ENST00000623941 599 ntBASIC12.97□□□□□ -0.33
DEFA4P12838 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DEFA4P12838 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DEFA4P12838 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
DEFA4P12838 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC12.97□□□□□ -0.33
DEFA4P12838 GSN-206ENST00000394353 2311 ntTSL 2 BASIC12.97□□□□□ -0.33
DEFA4P12838 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DEFA4P12838 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
DEFA4P12838 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.97□□□□□ -0.33
DEFA4P12838 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
DEFA4P12838 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
DEFA4P12838 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.97□□□□□ -0.33
DEFA4P12838 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DEFA4P12838 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
DEFA4P12838 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC12.97□□□□□ -0.33
DEFA4P12838 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
DEFA4P12838 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
DEFA4P12838 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
DEFA4P12838 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DEFA4P12838 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DEFA4P12838 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
DEFA4P12838 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
DEFA4P12838 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
DEFA4P12838 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
DEFA4P12838 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms