Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CTSDP07339 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CTSDP07339 AC073439.1-201ENST00000624121 1774 ntBASIC13.22□□□□□ -0.29
CTSDP07339 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.22□□□□□ -0.29
CTSDP07339 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
CTSDP07339 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CTSDP07339 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CTSDP07339 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CTSDP07339 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CTSDP07339 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CTSDP07339 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.21□□□□□ -0.29
CTSDP07339 AC023024.2-201ENST00000623561 1993 ntBASIC13.21□□□□□ -0.29
CTSDP07339 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CTSDP07339 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CTSDP07339 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CTSDP07339 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.21□□□□□ -0.29
CTSDP07339 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
CTSDP07339 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.21□□□□□ -0.29
CTSDP07339 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.21□□□□□ -0.29
CTSDP07339 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
CTSDP07339 PMS2P7-201ENST00000506558 1336 ntBASIC13.21□□□□□ -0.29
CTSDP07339 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CTSDP07339 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CTSDP07339 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
CTSDP07339 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CTSDP07339 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CTSDP07339 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CTSDP07339 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CTSDP07339 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CTSDP07339 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
CTSDP07339 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CTSDP07339 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
CTSDP07339 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CTSDP07339 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CTSDP07339 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CTSDP07339 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC13.21□□□□□ -0.29
CTSDP07339 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.21□□□□□ -0.29
CTSDP07339 AC243562.2-201ENST00000561247 970 ntBASIC13.21□□□□□ -0.29
CTSDP07339 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC13.21□□□□□ -0.29
CTSDP07339 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
CTSDP07339 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.21□□□□□ -0.29
CTSDP07339 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.21□□□□□ -0.29
CTSDP07339 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.21□□□□□ -0.29
CTSDP07339 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.21□□□□□ -0.29
CTSDP07339 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.21□□□□□ -0.29
CTSDP07339 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.21□□□□□ -0.29
CTSDP07339 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CTSDP07339 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CTSDP07339 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CTSDP07339 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CTSDP07339 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CTSDP07339 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.21□□□□□ -0.29
CTSDP07339 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.21□□□□□ -0.29
CTSDP07339 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.21□□□□□ -0.29
CTSDP07339 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
CTSDP07339 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.21□□□□□ -0.29
CTSDP07339 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.29
CTSDP07339 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CTSDP07339 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
CTSDP07339 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CTSDP07339 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
CTSDP07339 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.21□□□□□ -0.3
CTSDP07339 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
CTSDP07339 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.21□□□□□ -0.3
CTSDP07339 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.21□□□□□ -0.3
CTSDP07339 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CTSDP07339 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CTSDP07339 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CTSDP07339 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
CTSDP07339 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CTSDP07339 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSDP07339 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSDP07339 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSDP07339 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSDP07339 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSDP07339 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSDP07339 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSDP07339 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.2□□□□□ -0.3
CTSDP07339 AJ011931.1-201ENST00000618749 2492 ntBASIC13.2□□□□□ -0.3
CTSDP07339 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSDP07339 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.2□□□□□ -0.3
CTSDP07339 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CTSDP07339 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CTSDP07339 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.2□□□□□ -0.3
CTSDP07339 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSDP07339 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CTSDP07339 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.2□□□□□ -0.3
CTSDP07339 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSDP07339 ZBED1P1-201ENST00000502364 1930 ntBASIC13.2□□□□□ -0.3
CTSDP07339 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSDP07339 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSDP07339 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSDP07339 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CTSDP07339 DFFB-203ENST00000341385 572 ntTSL 5 BASIC13.2□□□□□ -0.3
CTSDP07339 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CTSDP07339 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.2□□□□□ -0.3
CTSDP07339 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.2□□□□□ -0.3
CTSDP07339 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.2□□□□□ -0.3
CTSDP07339 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CTSDP07339 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms