Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.94□□□□□ -0.18
LCATP04180 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LCATP04180 AC084121.4-201ENST00000641598 221 ntBASIC13.94□□□□□ -0.18
LCATP04180 AF228730.8-201ENST00000642140 221 ntBASIC13.94□□□□□ -0.18
LCATP04180 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
LCATP04180 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LCATP04180 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LCATP04180 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LCATP04180 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LCATP04180 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.94□□□□□ -0.18
LCATP04180 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LCATP04180 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LCATP04180 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LCATP04180 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
LCATP04180 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.94□□□□□ -0.18
LCATP04180 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
LCATP04180 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.93□□□□□ -0.18
LCATP04180 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LCATP04180 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
LCATP04180 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
LCATP04180 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
LCATP04180 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LCATP04180 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.93□□□□□ -0.18
LCATP04180 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
LCATP04180 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LCATP04180 BNIP3P1-202ENST00000550043 1585 ntBASIC13.93□□□□□ -0.18
LCATP04180 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.93□□□□□ -0.18
LCATP04180 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LCATP04180 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LCATP04180 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LCATP04180 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LCATP04180 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LCATP04180 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LCATP04180 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LCATP04180 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.93□□□□□ -0.18
LCATP04180 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LCATP04180 AC004987.2-201ENST00000395959 1148 ntBASIC13.93□□□□□ -0.18
LCATP04180 AL627223.1-201ENST00000416693 442 ntBASIC13.93□□□□□ -0.18
LCATP04180 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LCATP04180 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LCATP04180 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.93□□□□□ -0.18
LCATP04180 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.93□□□□□ -0.18
LCATP04180 AP000344.2-201ENST00000512987 629 ntBASIC13.93□□□□□ -0.18
LCATP04180 ALG1L8P-201ENST00000533887 760 ntBASIC13.93□□□□□ -0.18
LCATP04180 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.93□□□□□ -0.18
LCATP04180 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
LCATP04180 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.93□□□□□ -0.18
LCATP04180 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
LCATP04180 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LCATP04180 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.93□□□□□ -0.18
LCATP04180 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.93□□□□□ -0.18
LCATP04180 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.93□□□□□ -0.18
LCATP04180 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.93□□□□□ -0.18
LCATP04180 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LCATP04180 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LCATP04180 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LCATP04180 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
LCATP04180 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LCATP04180 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.93□□□□□ -0.18
LCATP04180 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.93□□□□□ -0.18
LCATP04180 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LCATP04180 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.93□□□□□ -0.18
LCATP04180 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LCATP04180 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LCATP04180 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
LCATP04180 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LCATP04180 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.92□□□□□ -0.18
LCATP04180 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LCATP04180 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LCATP04180 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LCATP04180 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LCATP04180 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LCATP04180 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LCATP04180 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LCATP04180 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.92□□□□□ -0.18
LCATP04180 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LCATP04180 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LCATP04180 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LCATP04180 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LCATP04180 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.92□□□□□ -0.18
LCATP04180 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LCATP04180 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LCATP04180 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.92□□□□□ -0.18
LCATP04180 RPS8P6-201ENST00000426177 609 ntBASIC13.92□□□□□ -0.18
LCATP04180 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.92□□□□□ -0.18
LCATP04180 AL353705.2-201ENST00000428243 662 ntBASIC13.92□□□□□ -0.18
LCATP04180 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LCATP04180 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LCATP04180 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.92□□□□□ -0.18
LCATP04180 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LCATP04180 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.92□□□□□ -0.18
LCATP04180 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.92□□□□□ -0.18
LCATP04180 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.92□□□□□ -0.18
LCATP04180 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.92□□□□□ -0.18
LCATP04180 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.92□□□□□ -0.18
LCATP04180 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.92□□□□□ -0.18
LCATP04180 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LCATP04180 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LCATP04180 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LCATP04180 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms