Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
IFNB1P01574 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.48■□□□□ 0.23
IFNB1P01574 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.48■□□□□ 0.23
IFNB1P01574 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.48■□□□□ 0.23
IFNB1P01574 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.48■□□□□ 0.23
IFNB1P01574 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.48■□□□□ 0.23
IFNB1P01574 AC106730.1-201ENST00000566722 1090 ntBASIC16.48■□□□□ 0.23
IFNB1P01574 AC061975.2-201ENST00000581722 295 ntBASIC16.48■□□□□ 0.23
IFNB1P01574 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
IFNB1P01574 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.48■□□□□ 0.23
IFNB1P01574 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IFNB1P01574 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
IFNB1P01574 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.48■□□□□ 0.23
IFNB1P01574 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IFNB1P01574 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IFNB1P01574 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IFNB1P01574 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IFNB1P01574 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.48■□□□□ 0.23
IFNB1P01574 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
IFNB1P01574 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
IFNB1P01574 OR2I1P-210ENST00000642037 4691 ntBASIC16.48■□□□□ 0.23
IFNB1P01574 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
IFNB1P01574 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
IFNB1P01574 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IFNB1P01574 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
IFNB1P01574 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
IFNB1P01574 BNIP3P1-202ENST00000550043 1585 ntBASIC16.47■□□□□ 0.23
IFNB1P01574 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.47■□□□□ 0.23
IFNB1P01574 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IFNB1P01574 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
IFNB1P01574 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IFNB1P01574 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IFNB1P01574 AL691432.1-201ENST00000596308 1422 ntBASIC16.47■□□□□ 0.23
IFNB1P01574 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IFNB1P01574 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
IFNB1P01574 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.47■□□□□ 0.23
IFNB1P01574 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IFNB1P01574 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.47■□□□□ 0.23
IFNB1P01574 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.47■□□□□ 0.23
IFNB1P01574 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IFNB1P01574 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
IFNB1P01574 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.47■□□□□ 0.23
IFNB1P01574 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
IFNB1P01574 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.47■□□□□ 0.23
IFNB1P01574 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
IFNB1P01574 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IFNB1P01574 RNA5SP410-201ENST00000516285 106 ntBASIC16.47■□□□□ 0.23
IFNB1P01574 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.47■□□□□ 0.23
IFNB1P01574 AL109954.1-202ENST00000564051 2148 ntBASIC16.47■□□□□ 0.23
IFNB1P01574 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.47■□□□□ 0.23
IFNB1P01574 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.47■□□□□ 0.23
IFNB1P01574 FAM197Y3-203ENST00000618346 717 ntBASIC16.47■□□□□ 0.23
IFNB1P01574 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.47■□□□□ 0.23
IFNB1P01574 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IFNB1P01574 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.47■□□□□ 0.23
IFNB1P01574 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
IFNB1P01574 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IFNB1P01574 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
IFNB1P01574 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
IFNB1P01574 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IFNB1P01574 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IFNB1P01574 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
IFNB1P01574 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IFNB1P01574 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.46■□□□□ 0.23
IFNB1P01574 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFNB1P01574 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IFNB1P01574 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFNB1P01574 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
IFNB1P01574 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
IFNB1P01574 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFNB1P01574 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFNB1P01574 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.46■□□□□ 0.23
IFNB1P01574 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
IFNB1P01574 AC006486.2-201ENST00000624246 2199 ntBASIC16.46■□□□□ 0.23
IFNB1P01574 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.46■□□□□ 0.23
IFNB1P01574 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.46■□□□□ 0.23
IFNB1P01574 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.46■□□□□ 0.23
IFNB1P01574 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFNB1P01574 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFNB1P01574 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IFNB1P01574 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
IFNB1P01574 FAM58CP-201ENST00000435741 640 ntBASIC16.46■□□□□ 0.23
IFNB1P01574 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.46■□□□□ 0.23
IFNB1P01574 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.46■□□□□ 0.23
IFNB1P01574 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.46■□□□□ 0.23
IFNB1P01574 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.46■□□□□ 0.23
IFNB1P01574 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.46■□□□□ 0.23
IFNB1P01574 AC008267.7-201ENST00000624570 1194 ntBASIC16.46■□□□□ 0.23
IFNB1P01574 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFNB1P01574 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
IFNB1P01574 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
IFNB1P01574 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IFNB1P01574 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFNB1P01574 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFNB1P01574 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
IFNB1P01574 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.46■□□□□ 0.22
IFNB1P01574 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
IFNB1P01574 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.46■□□□□ 0.22
IFNB1P01574 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
IFNB1P01574 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.46■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms