Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PDGFBP01127 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.73■□□□□ 0.11
PDGFBP01127 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFBP01127 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFBP01127 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.73■□□□□ 0.11
PDGFBP01127 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFBP01127 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFBP01127 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFBP01127 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
PDGFBP01127 AC148477.4-201ENST00000613430 1793 ntBASIC15.72■□□□□ 0.11
PDGFBP01127 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFBP01127 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.72■□□□□ 0.11
PDGFBP01127 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFBP01127 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFBP01127 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PDGFBP01127 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.72■□□□□ 0.11
PDGFBP01127 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.72■□□□□ 0.11
PDGFBP01127 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.72■□□□□ 0.11
PDGFBP01127 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.72■□□□□ 0.11
PDGFBP01127 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC15.72■□□□□ 0.11
PDGFBP01127 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.72■□□□□ 0.11
PDGFBP01127 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.72■□□□□ 0.11
PDGFBP01127 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.72■□□□□ 0.11
PDGFBP01127 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC15.72■□□□□ 0.11
PDGFBP01127 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC15.72■□□□□ 0.11
PDGFBP01127 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC15.72■□□□□ 0.11
PDGFBP01127 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC15.72■□□□□ 0.11
PDGFBP01127 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.72■□□□□ 0.11
PDGFBP01127 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.72■□□□□ 0.11
PDGFBP01127 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
PDGFBP01127 NPM1P43-201ENST00000558669 786 ntBASIC15.72■□□□□ 0.11
PDGFBP01127 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
PDGFBP01127 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFBP01127 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.72■□□□□ 0.11
PDGFBP01127 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFBP01127 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.72■□□□□ 0.11
PDGFBP01127 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PDGFBP01127 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFBP01127 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFBP01127 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFBP01127 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFBP01127 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFBP01127 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.71■□□□□ 0.11
PDGFBP01127 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.71■□□□□ 0.11
PDGFBP01127 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
PDGFBP01127 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
PDGFBP01127 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
PDGFBP01127 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFBP01127 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFBP01127 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.71■□□□□ 0.11
PDGFBP01127 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFBP01127 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFBP01127 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PDGFBP01127 FZD10-202ENST00000539839 3282 ntBASIC15.71■□□□□ 0.11
PDGFBP01127 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.71■□□□□ 0.11
PDGFBP01127 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.71■□□□□ 0.11
PDGFBP01127 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFBP01127 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFBP01127 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFBP01127 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFBP01127 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFBP01127 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.71■□□□□ 0.11
PDGFBP01127 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFBP01127 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC15.71■□□□□ 0.11
PDGFBP01127 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFBP01127 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC15.71■□□□□ 0.11
PDGFBP01127 AC098935.1-201ENST00000446057 611 ntBASIC15.71■□□□□ 0.11
PDGFBP01127 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC15.71■□□□□ 0.11
PDGFBP01127 RN7SL181P-201ENST00000462921 277 ntBASIC15.71■□□□□ 0.11
PDGFBP01127 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFBP01127 AC125604.1-201ENST00000496255 707 ntBASIC15.71■□□□□ 0.11
PDGFBP01127 PGAM1P5-201ENST00000548011 764 ntBASIC15.71■□□□□ 0.11
PDGFBP01127 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.71■□□□□ 0.11
PDGFBP01127 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PDGFBP01127 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
PDGFBP01127 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC15.71■□□□□ 0.11
PDGFBP01127 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC15.71■□□□□ 0.11
PDGFBP01127 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PDGFBP01127 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
PDGFBP01127 AL390961.4-201ENST00000623958 2535 ntBASIC15.71■□□□□ 0.11
PDGFBP01127 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFBP01127 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFBP01127 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.71■□□□□ 0.1
PDGFBP01127 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
PDGFBP01127 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PDGFBP01127 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.7■□□□□ 0.1
PDGFBP01127 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.7■□□□□ 0.1
PDGFBP01127 OR6D1P-202ENST00000641007 5290 ntBASIC15.7■□□□□ 0.1
PDGFBP01127 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.7■□□□□ 0.1
PDGFBP01127 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PDGFBP01127 UBALD1-205ENST00000590891 2641 ntBASIC15.7■□□□□ 0.1
PDGFBP01127 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFBP01127 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFBP01127 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFBP01127 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFBP01127 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFBP01127 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFBP01127 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PDGFBP01127 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFBP01127 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms