Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.88■□□□□ 0.29
TIMP1P01033 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.88■□□□□ 0.29
TIMP1P01033 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TIMP1P01033 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP1P01033 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP1P01033 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP1P01033 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TIMP1P01033 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TIMP1P01033 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TIMP1P01033 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TIMP1P01033 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.87■□□□□ 0.29
TIMP1P01033 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TIMP1P01033 AC005052.1-201ENST00000625181 2492 ntBASIC16.87■□□□□ 0.29
TIMP1P01033 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.87■□□□□ 0.29
TIMP1P01033 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TIMP1P01033 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TIMP1P01033 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TIMP1P01033 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.87■□□□□ 0.29
TIMP1P01033 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.87■□□□□ 0.29
TIMP1P01033 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.87■□□□□ 0.29
TIMP1P01033 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.87■□□□□ 0.29
TIMP1P01033 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.87■□□□□ 0.29
TIMP1P01033 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.87■□□□□ 0.29
TIMP1P01033 AC005740.2-201ENST00000511085 419 ntBASIC16.87■□□□□ 0.29
TIMP1P01033 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.87■□□□□ 0.29
TIMP1P01033 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.87■□□□□ 0.29
TIMP1P01033 AC022217.1-201ENST00000521069 738 ntBASIC16.87■□□□□ 0.29
TIMP1P01033 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
TIMP1P01033 AC005730.2-201ENST00000564549 1184 ntBASIC16.87■□□□□ 0.29
TIMP1P01033 RN7SL574P-201ENST00000581512 297 ntBASIC16.87■□□□□ 0.29
TIMP1P01033 RN7SL713P-201ENST00000582127 302 ntBASIC16.87■□□□□ 0.29
TIMP1P01033 AL645939.5-201ENST00000606834 243 ntBASIC16.87■□□□□ 0.29
TIMP1P01033 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.87■□□□□ 0.29
TIMP1P01033 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC16.87■□□□□ 0.29
TIMP1P01033 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
TIMP1P01033 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.87■□□□□ 0.29
TIMP1P01033 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TIMP1P01033 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TIMP1P01033 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TIMP1P01033 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TIMP1P01033 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TIMP1P01033 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TIMP1P01033 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
TIMP1P01033 AL133373.2-201ENST00000623187 2828 ntBASIC16.87■□□□□ 0.29
TIMP1P01033 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TIMP1P01033 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.87■□□□□ 0.29
TIMP1P01033 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TIMP1P01033 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TIMP1P01033 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
TIMP1P01033 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TIMP1P01033 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TIMP1P01033 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
TIMP1P01033 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TIMP1P01033 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
TIMP1P01033 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TIMP1P01033 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.86■□□□□ 0.29
TIMP1P01033 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
TIMP1P01033 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TIMP1P01033 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TIMP1P01033 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TIMP1P01033 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC16.86■□□□□ 0.29
TIMP1P01033 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.86■□□□□ 0.29
TIMP1P01033 AC008267.1-201ENST00000474858 1069 ntBASIC16.86■□□□□ 0.29
TIMP1P01033 AC024681.1-201ENST00000521917 487 ntBASIC16.86■□□□□ 0.29
TIMP1P01033 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.86■□□□□ 0.29
TIMP1P01033 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.86■□□□□ 0.29
TIMP1P01033 PRKXP1-201ENST00000561423 1122 ntBASIC16.86■□□□□ 0.29
TIMP1P01033 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.86■□□□□ 0.29
TIMP1P01033 ZACNP1-201ENST00000612259 710 ntBASIC16.86■□□□□ 0.29
TIMP1P01033 AC100757.4-201ENST00000626934 759 ntBASIC16.86■□□□□ 0.29
TIMP1P01033 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TIMP1P01033 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.86■□□□□ 0.29
TIMP1P01033 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TIMP1P01033 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TIMP1P01033 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.86■□□□□ 0.29
TIMP1P01033 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TIMP1P01033 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TIMP1P01033 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TIMP1P01033 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
TIMP1P01033 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TIMP1P01033 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.86■□□□□ 0.29
TIMP1P01033 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.86■□□□□ 0.29
TIMP1P01033 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TIMP1P01033 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
TIMP1P01033 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TIMP1P01033 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TIMP1P01033 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TIMP1P01033 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TIMP1P01033 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TIMP1P01033 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.85■□□□□ 0.29
TIMP1P01033 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TIMP1P01033 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TIMP1P01033 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.85■□□□□ 0.29
TIMP1P01033 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TIMP1P01033 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TIMP1P01033 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TIMP1P01033 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
TIMP1P01033 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.85■□□□□ 0.29
TIMP1P01033 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.85■□□□□ 0.29
TIMP1P01033 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms