Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CNOT4O95628 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CNOT4O95628 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.16□□□□□ -0.14
CNOT4O95628 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.16□□□□□ -0.14
CNOT4O95628 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CNOT4O95628 AC022144.1-201ENST00000602255 1580 ntBASIC14.16□□□□□ -0.14
CNOT4O95628 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.16□□□□□ -0.14
CNOT4O95628 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
CNOT4O95628 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CNOT4O95628 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
CNOT4O95628 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CNOT4O95628 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.16□□□□□ -0.14
CNOT4O95628 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CNOT4O95628 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.16□□□□□ -0.14
CNOT4O95628 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CNOT4O95628 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CNOT4O95628 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.16□□□□□ -0.14
CNOT4O95628 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CNOT4O95628 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CNOT4O95628 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNOT4O95628 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNOT4O95628 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CNOT4O95628 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.15□□□□□ -0.14
CNOT4O95628 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNOT4O95628 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNOT4O95628 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNOT4O95628 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNOT4O95628 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.15□□□□□ -0.14
CNOT4O95628 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNOT4O95628 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CNOT4O95628 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.15□□□□□ -0.14
CNOT4O95628 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CNOT4O95628 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
CNOT4O95628 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNOT4O95628 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
CNOT4O95628 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CNOT4O95628 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CNOT4O95628 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNOT4O95628 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNOT4O95628 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNOT4O95628 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.15□□□□□ -0.14
CNOT4O95628 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.15□□□□□ -0.14
CNOT4O95628 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.15□□□□□ -0.14
CNOT4O95628 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNOT4O95628 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNOT4O95628 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CNOT4O95628 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CNOT4O95628 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CNOT4O95628 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.15□□□□□ -0.14
CNOT4O95628 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.15□□□□□ -0.14
CNOT4O95628 AC009477.1-201ENST00000452936 217 ntBASIC14.15□□□□□ -0.14
CNOT4O95628 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.15□□□□□ -0.14
CNOT4O95628 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.15□□□□□ -0.14
CNOT4O95628 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.15□□□□□ -0.14
CNOT4O95628 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.15□□□□□ -0.14
CNOT4O95628 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.15□□□□□ -0.14
CNOT4O95628 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.15□□□□□ -0.14
CNOT4O95628 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.15□□□□□ -0.14
CNOT4O95628 AC009118.2-201ENST00000613275 655 ntBASIC14.15□□□□□ -0.14
CNOT4O95628 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.15□□□□□ -0.14
CNOT4O95628 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CNOT4O95628 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.15□□□□□ -0.14
CNOT4O95628 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.15□□□□□ -0.14
CNOT4O95628 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNOT4O95628 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CNOT4O95628 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNOT4O95628 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.15□□□□□ -0.14
CNOT4O95628 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.15□□□□□ -0.14
CNOT4O95628 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CNOT4O95628 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CNOT4O95628 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNOT4O95628 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.15□□□□□ -0.14
CNOT4O95628 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.15□□□□□ -0.14
CNOT4O95628 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNOT4O95628 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNOT4O95628 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.15□□□□□ -0.15
CNOT4O95628 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.15□□□□□ -0.15
CNOT4O95628 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CNOT4O95628 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CNOT4O95628 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CNOT4O95628 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.14□□□□□ -0.15
CNOT4O95628 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CNOT4O95628 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CNOT4O95628 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CNOT4O95628 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CNOT4O95628 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CNOT4O95628 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CNOT4O95628 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CNOT4O95628 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CNOT4O95628 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CNOT4O95628 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CNOT4O95628 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CNOT4O95628 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CNOT4O95628 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.14□□□□□ -0.15
CNOT4O95628 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CNOT4O95628 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
CNOT4O95628 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
CNOT4O95628 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.14□□□□□ -0.15
CNOT4O95628 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.14□□□□□ -0.15
CNOT4O95628 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms