Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AC015922.1-201ENST00000421102 1152 ntBASIC16.74■□□□□ 0.27
RTN3O95197 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.74■□□□□ 0.27
RTN3O95197 MEP1AP4-201ENST00000423244 1087 ntBASIC16.74■□□□□ 0.27
RTN3O95197 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.74■□□□□ 0.27
RTN3O95197 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.74■□□□□ 0.27
RTN3O95197 PHKG1P2-201ENST00000457537 863 ntBASIC16.74■□□□□ 0.27
RTN3O95197 AC092337.1-201ENST00000568699 1129 ntBASIC16.74■□□□□ 0.27
RTN3O95197 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.74■□□□□ 0.27
RTN3O95197 SPDYE22P-201ENST00000582158 798 ntBASIC16.74■□□□□ 0.27
RTN3O95197 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTN3O95197 AL596087.1-201ENST00000400979 1969 ntBASIC16.74■□□□□ 0.27
RTN3O95197 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RTN3O95197 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RTN3O95197 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RTN3O95197 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTN3O95197 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
RTN3O95197 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.74■□□□□ 0.27
RTN3O95197 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RTN3O95197 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
RTN3O95197 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.74■□□□□ 0.27
RTN3O95197 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
RTN3O95197 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTN3O95197 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTN3O95197 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTN3O95197 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.73■□□□□ 0.27
RTN3O95197 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.73■□□□□ 0.27
RTN3O95197 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.73■□□□□ 0.27
RTN3O95197 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTN3O95197 REXO1L1P-202ENST00000608646 1974 ntBASIC16.73■□□□□ 0.27
RTN3O95197 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RTN3O95197 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTN3O95197 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RTN3O95197 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTN3O95197 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RTN3O95197 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RTN3O95197 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
RTN3O95197 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTN3O95197 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RTN3O95197 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RTN3O95197 GNAQP1-201ENST00000444815 1067 ntBASIC16.73■□□□□ 0.27
RTN3O95197 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.73■□□□□ 0.27
RTN3O95197 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RTN3O95197 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.73■□□□□ 0.27
RTN3O95197 SPDYE18-201ENST00000510091 1050 ntBASIC16.73■□□□□ 0.27
RTN3O95197 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.73■□□□□ 0.27
RTN3O95197 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.73■□□□□ 0.27
RTN3O95197 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
RTN3O95197 AL450472.2-201ENST00000603663 1156 ntBASIC16.73■□□□□ 0.27
RTN3O95197 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.73■□□□□ 0.27
RTN3O95197 AL662799.1-202ENST00000614205 422 ntBASIC16.73■□□□□ 0.27
RTN3O95197 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTN3O95197 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTN3O95197 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTN3O95197 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.73■□□□□ 0.27
RTN3O95197 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.73■□□□□ 0.27
RTN3O95197 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTN3O95197 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTN3O95197 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTN3O95197 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
RTN3O95197 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.73■□□□□ 0.27
RTN3O95197 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.73■□□□□ 0.27
RTN3O95197 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
RTN3O95197 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTN3O95197 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTN3O95197 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTN3O95197 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTN3O95197 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTN3O95197 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RTN3O95197 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTN3O95197 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTN3O95197 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTN3O95197 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTN3O95197 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTN3O95197 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTN3O95197 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTN3O95197 AC087499.6-201ENST00000411576 835 ntBASIC16.72■□□□□ 0.27
RTN3O95197 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.72■□□□□ 0.27
RTN3O95197 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTN3O95197 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTN3O95197 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.72■□□□□ 0.27
RTN3O95197 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.72■□□□□ 0.27
RTN3O95197 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.72■□□□□ 0.27
RTN3O95197 AL358472.5-202ENST00000641448 1267 ntBASIC16.72■□□□□ 0.27
RTN3O95197 AF228730.6-201ENST00000641497 218 ntBASIC16.72■□□□□ 0.27
RTN3O95197 AC084121.3-201ENST00000641716 218 ntBASIC16.72■□□□□ 0.27
RTN3O95197 AC105233.6-201ENST00000642093 218 ntBASIC16.72■□□□□ 0.27
RTN3O95197 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
RTN3O95197 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTN3O95197 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RTN3O95197 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTN3O95197 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTN3O95197 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RTN3O95197 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTN3O95197 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTN3O95197 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTN3O95197 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTN3O95197 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTN3O95197 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTN3O95197 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.72■□□□□ 0.27
RTN3O95197 DBET-201ENST00000630918 3363 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms