Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.19□□□□□ -0.14
CXCL13O43927 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.19□□□□□ -0.14
CXCL13O43927 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL13O43927 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL13O43927 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.19□□□□□ -0.14
CXCL13O43927 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CXCL13O43927 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.19□□□□□ -0.14
CXCL13O43927 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CXCL13O43927 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.19□□□□□ -0.14
CXCL13O43927 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CXCL13O43927 SPDYE19P-201ENST00000338590 713 ntBASIC14.19□□□□□ -0.14
CXCL13O43927 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.19□□□□□ -0.14
CXCL13O43927 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL13O43927 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.19□□□□□ -0.14
CXCL13O43927 AC074338.1-201ENST00000416825 156 ntBASIC14.19□□□□□ -0.14
CXCL13O43927 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.19□□□□□ -0.14
CXCL13O43927 AC136604.1-201ENST00000418535 575 ntBASIC14.19□□□□□ -0.14
CXCL13O43927 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.19□□□□□ -0.14
CXCL13O43927 SPTLC1P1-201ENST00000447199 261 ntBASIC14.19□□□□□ -0.14
CXCL13O43927 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.19□□□□□ -0.14
CXCL13O43927 AL589987.1-201ENST00000453380 819 ntBASIC14.19□□□□□ -0.14
CXCL13O43927 DOC2GP-202ENST00000514950 1163 ntBASIC14.19□□□□□ -0.14
CXCL13O43927 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.19□□□□□ -0.14
CXCL13O43927 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.19□□□□□ -0.14
CXCL13O43927 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL13O43927 AC138761.1-201ENST00000584393 385 ntBASIC14.19□□□□□ -0.14
CXCL13O43927 SRD5A3P1-201ENST00000603021 949 ntBASIC14.19□□□□□ -0.14
CXCL13O43927 AC097359.3-201ENST00000603982 1210 ntBASIC14.19□□□□□ -0.14
CXCL13O43927 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL13O43927 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL13O43927 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.19□□□□□ -0.14
CXCL13O43927 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL13O43927 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL13O43927 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL13O43927 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.19□□□□□ -0.14
CXCL13O43927 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL13O43927 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.19□□□□□ -0.14
CXCL13O43927 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CXCL13O43927 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
CXCL13O43927 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL13O43927 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL13O43927 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL13O43927 AC008741.2-201ENST00000612792 3115 ntBASIC14.19□□□□□ -0.14
CXCL13O43927 AC008894.3-201ENST00000624324 3103 ntBASIC14.19□□□□□ -0.14
CXCL13O43927 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL13O43927 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL13O43927 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL13O43927 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL13O43927 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL13O43927 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CXCL13O43927 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL13O43927 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL13O43927 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL13O43927 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL13O43927 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.18□□□□□ -0.14
CXCL13O43927 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL13O43927 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL13O43927 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CXCL13O43927 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL13O43927 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL13O43927 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CXCL13O43927 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL13O43927 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL13O43927 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL13O43927 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL13O43927 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL13O43927 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
CXCL13O43927 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL13O43927 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL13O43927 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CXCL13O43927 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL13O43927 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.18□□□□□ -0.14
CXCL13O43927 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CXCL13O43927 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CXCL13O43927 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL13O43927 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.18□□□□□ -0.14
CXCL13O43927 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.18□□□□□ -0.14
CXCL13O43927 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.18□□□□□ -0.14
CXCL13O43927 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.18□□□□□ -0.14
CXCL13O43927 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.18□□□□□ -0.14
CXCL13O43927 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.18□□□□□ -0.14
CXCL13O43927 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.18□□□□□ -0.14
CXCL13O43927 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.18□□□□□ -0.14
CXCL13O43927 MIR4313-201ENST00000580760 101 ntBASIC14.18□□□□□ -0.14
CXCL13O43927 AC004790.1-201ENST00000612686 536 ntBASIC14.18□□□□□ -0.14
CXCL13O43927 AF228730.6-201ENST00000641497 218 ntBASIC14.18□□□□□ -0.14
CXCL13O43927 AC084121.3-201ENST00000641716 218 ntBASIC14.18□□□□□ -0.14
CXCL13O43927 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.18□□□□□ -0.14
CXCL13O43927 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL13O43927 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.18□□□□□ -0.14
CXCL13O43927 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL13O43927 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL13O43927 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL13O43927 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.18□□□□□ -0.14
CXCL13O43927 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL13O43927 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL13O43927 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL13O43927 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL13O43927 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.18□□□□□ -0.14
CXCL13O43927 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms