Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6DO43924 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6DO43924 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
PDE6DO43924 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC12.35□□□□□ -0.43
PDE6DO43924 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC12.35□□□□□ -0.43
PDE6DO43924 AL645939.2-201ENST00000427340 991 ntBASIC12.35□□□□□ -0.43
PDE6DO43924 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
PDE6DO43924 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6DO43924 MINOS1P3-201ENST00000457048 203 ntBASIC12.35□□□□□ -0.43
PDE6DO43924 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6DO43924 AC096582.2-201ENST00000510860 516 ntBASIC12.35□□□□□ -0.43
PDE6DO43924 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6DO43924 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6DO43924 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6DO43924 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC12.35□□□□□ -0.43
PDE6DO43924 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6DO43924 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC12.35□□□□□ -0.43
PDE6DO43924 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC12.35□□□□□ -0.43
PDE6DO43924 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC12.35□□□□□ -0.43
PDE6DO43924 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
PDE6DO43924 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6DO43924 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6DO43924 REXO1L1P-202ENST00000608646 1974 ntBASIC12.35□□□□□ -0.43
PDE6DO43924 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.35□□□□□ -0.43
PDE6DO43924 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6DO43924 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.35□□□□□ -0.43
PDE6DO43924 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6DO43924 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6DO43924 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6DO43924 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6DO43924 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.35□□□□□ -0.43
PDE6DO43924 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6DO43924 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6DO43924 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.35□□□□□ -0.43
PDE6DO43924 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6DO43924 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6DO43924 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.35□□□□□ -0.43
PDE6DO43924 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.35□□□□□ -0.43
PDE6DO43924 AC117489.1-201ENST00000625169 3217 ntBASIC12.35□□□□□ -0.43
PDE6DO43924 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6DO43924 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6DO43924 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6DO43924 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
PDE6DO43924 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
PDE6DO43924 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6DO43924 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
PDE6DO43924 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6DO43924 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6DO43924 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC12.34□□□□□ -0.43
PDE6DO43924 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.34□□□□□ -0.43
PDE6DO43924 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.34□□□□□ -0.43
PDE6DO43924 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6DO43924 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6DO43924 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6DO43924 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
PDE6DO43924 PTENP1-202ENST00000532280 3996 ntBASIC12.34□□□□□ -0.43
PDE6DO43924 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6DO43924 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.34□□□□□ -0.43
PDE6DO43924 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC12.34□□□□□ -0.43
PDE6DO43924 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.34□□□□□ -0.43
PDE6DO43924 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6DO43924 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6DO43924 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6DO43924 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.34□□□□□ -0.43
PDE6DO43924 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6DO43924 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6DO43924 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6DO43924 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
PDE6DO43924 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.34□□□□□ -0.43
PDE6DO43924 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6DO43924 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
PDE6DO43924 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6DO43924 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC12.34□□□□□ -0.43
PDE6DO43924 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6DO43924 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC12.34□□□□□ -0.43
PDE6DO43924 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC12.34□□□□□ -0.43
PDE6DO43924 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC12.34□□□□□ -0.43
PDE6DO43924 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC12.34□□□□□ -0.43
PDE6DO43924 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC12.34□□□□□ -0.43
PDE6DO43924 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6DO43924 AC145285.6-201ENST00000604632 637 ntBASIC12.34□□□□□ -0.43
PDE6DO43924 AL139424.1-201ENST00000607572 797 ntBASIC12.34□□□□□ -0.43
PDE6DO43924 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.34□□□□□ -0.43
PDE6DO43924 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.34□□□□□ -0.43
PDE6DO43924 AC010327.5-201ENST00000586923 3061 ntBASIC12.34□□□□□ -0.43
PDE6DO43924 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
PDE6DO43924 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6DO43924 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6DO43924 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6DO43924 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6DO43924 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6DO43924 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6DO43924 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6DO43924 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.34□□□□□ -0.43
PDE6DO43924 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.34□□□□□ -0.43
PDE6DO43924 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6DO43924 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6DO43924 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.34□□□□□ -0.43
PDE6DO43924 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
PDE6DO43924 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms