Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.13■□□□□ 0.17
RIPK2O43353 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RIPK2O43353 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RIPK2O43353 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RIPK2O43353 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RIPK2O43353 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RIPK2O43353 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RIPK2O43353 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RIPK2O43353 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RIPK2O43353 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RIPK2O43353 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RIPK2O43353 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RIPK2O43353 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RIPK2O43353 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.13■□□□□ 0.17
RIPK2O43353 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RIPK2O43353 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.13■□□□□ 0.17
RIPK2O43353 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.13■□□□□ 0.17
RIPK2O43353 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RIPK2O43353 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RIPK2O43353 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RIPK2O43353 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.13■□□□□ 0.17
RIPK2O43353 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.12■□□□□ 0.17
RIPK2O43353 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RIPK2O43353 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RIPK2O43353 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.12■□□□□ 0.17
RIPK2O43353 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
RIPK2O43353 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RIPK2O43353 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RIPK2O43353 AC140479.7-201ENST00000636301 2332 ntBASIC16.12■□□□□ 0.17
RIPK2O43353 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.12■□□□□ 0.17
RIPK2O43353 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.12■□□□□ 0.17
RIPK2O43353 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.12■□□□□ 0.17
RIPK2O43353 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RIPK2O43353 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.12■□□□□ 0.17
RIPK2O43353 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RIPK2O43353 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.12■□□□□ 0.17
RIPK2O43353 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.12■□□□□ 0.17
RIPK2O43353 RHOQP3-201ENST00000437982 621 ntBASIC16.12■□□□□ 0.17
RIPK2O43353 AC140658.5-201ENST00000438532 169 ntBASIC16.12■□□□□ 0.17
RIPK2O43353 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.12■□□□□ 0.17
RIPK2O43353 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RIPK2O43353 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.12■□□□□ 0.17
RIPK2O43353 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.12■□□□□ 0.17
RIPK2O43353 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.12■□□□□ 0.17
RIPK2O43353 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.12■□□□□ 0.17
RIPK2O43353 AC061975.2-201ENST00000581722 295 ntBASIC16.12■□□□□ 0.17
RIPK2O43353 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.12■□□□□ 0.17
RIPK2O43353 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RIPK2O43353 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.12■□□□□ 0.17
RIPK2O43353 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.12■□□□□ 0.17
RIPK2O43353 AC010507.1-201ENST00000633895 436 ntBASIC16.12■□□□□ 0.17
RIPK2O43353 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RIPK2O43353 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RIPK2O43353 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.12■□□□□ 0.17
RIPK2O43353 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RIPK2O43353 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RIPK2O43353 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
RIPK2O43353 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RIPK2O43353 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RIPK2O43353 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.12■□□□□ 0.17
RIPK2O43353 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.12■□□□□ 0.17
RIPK2O43353 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RIPK2O43353 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RIPK2O43353 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.12■□□□□ 0.17
RIPK2O43353 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.12■□□□□ 0.17
RIPK2O43353 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.12■□□□□ 0.17
RIPK2O43353 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RIPK2O43353 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RIPK2O43353 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RIPK2O43353 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RIPK2O43353 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.12■□□□□ 0.17
RIPK2O43353 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RIPK2O43353 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RIPK2O43353 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RIPK2O43353 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RIPK2O43353 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RIPK2O43353 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RIPK2O43353 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.11■□□□□ 0.17
RIPK2O43353 CICP4-201ENST00000447359 2812 ntBASIC16.11■□□□□ 0.17
RIPK2O43353 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RIPK2O43353 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RIPK2O43353 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RIPK2O43353 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RIPK2O43353 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RIPK2O43353 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RIPK2O43353 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RIPK2O43353 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RIPK2O43353 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RIPK2O43353 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.11■□□□□ 0.17
RIPK2O43353 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.11■□□□□ 0.17
RIPK2O43353 FAM197Y8-203ENST00000450145 560 ntBASIC16.11■□□□□ 0.17
RIPK2O43353 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
RIPK2O43353 AC096734.2-201ENST00000562054 433 ntBASIC16.11■□□□□ 0.17
RIPK2O43353 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.11■□□□□ 0.17
RIPK2O43353 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.11■□□□□ 0.17
RIPK2O43353 IFNL4P1-201ENST00000607083 540 ntBASIC16.11■□□□□ 0.17
RIPK2O43353 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.11■□□□□ 0.17
RIPK2O43353 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RIPK2O43353 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RIPK2O43353 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms