Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC10.91□□□□□ -0.66
NDUFA1O15239 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 AC091951.1-201ENST00000512854 2465 ntBASIC10.91□□□□□ -0.66
NDUFA1O15239 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 AC012569.1-201ENST00000591191 1524 ntBASIC10.91□□□□□ -0.66
NDUFA1O15239 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
NDUFA1O15239 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 MRPL20P1-201ENST00000400819 433 ntBASIC10.91□□□□□ -0.66
NDUFA1O15239 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC10.91□□□□□ -0.66
NDUFA1O15239 ATP6V0CP3-201ENST00000417255 467 ntBASIC10.91□□□□□ -0.66
NDUFA1O15239 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC10.91□□□□□ -0.66
NDUFA1O15239 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC10.91□□□□□ -0.66
NDUFA1O15239 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
NDUFA1O15239 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC10.91□□□□□ -0.66
NDUFA1O15239 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC10.91□□□□□ -0.66
NDUFA1O15239 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC10.91□□□□□ -0.66
NDUFA1O15239 ETFA-208ENST00000559602 792 ntTSL 3 BASIC10.91□□□□□ -0.66
NDUFA1O15239 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC10.91□□□□□ -0.66
NDUFA1O15239 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
NDUFA1O15239 AC008667.4-201ENST00000607370 168 ntBASIC10.91□□□□□ -0.66
NDUFA1O15239 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
NDUFA1O15239 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC10.91□□□□□ -0.66
NDUFA1O15239 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC10.91□□□□□ -0.66
NDUFA1O15239 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
NDUFA1O15239 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC10.91□□□□□ -0.66
NDUFA1O15239 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC10.91□□□□□ -0.66
NDUFA1O15239 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
NDUFA1O15239 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
NDUFA1O15239 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC10.91□□□□□ -0.66
NDUFA1O15239 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 AMT-204ENST00000427987 1646 ntTSL 5 BASIC10.91□□□□□ -0.66
NDUFA1O15239 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC10.91□□□□□ -0.66
NDUFA1O15239 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC10.91□□□□□ -0.66
NDUFA1O15239 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC10.91□□□□□ -0.66
NDUFA1O15239 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC10.91□□□□□ -0.66
NDUFA1O15239 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
NDUFA1O15239 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
NDUFA1O15239 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NDUFA1O15239 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
NDUFA1O15239 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NDUFA1O15239 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC10.9□□□□□ -0.66
NDUFA1O15239 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
NDUFA1O15239 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NDUFA1O15239 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC10.9□□□□□ -0.66
NDUFA1O15239 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NDUFA1O15239 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC10.9□□□□□ -0.66
NDUFA1O15239 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NDUFA1O15239 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NDUFA1O15239 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NDUFA1O15239 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NDUFA1O15239 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
NDUFA1O15239 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NDUFA1O15239 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NDUFA1O15239 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NDUFA1O15239 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NDUFA1O15239 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
NDUFA1O15239 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC10.9□□□□□ -0.66
NDUFA1O15239 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NDUFA1O15239 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
NDUFA1O15239 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NDUFA1O15239 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC10.9□□□□□ -0.66
NDUFA1O15239 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NDUFA1O15239 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NDUFA1O15239 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
NDUFA1O15239 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC10.9□□□□□ -0.66
NDUFA1O15239 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC10.9□□□□□ -0.66
NDUFA1O15239 RPS2P1-201ENST00000434010 821 ntBASIC10.9□□□□□ -0.66
NDUFA1O15239 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC10.9□□□□□ -0.66
NDUFA1O15239 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC10.9□□□□□ -0.66
NDUFA1O15239 SDHD-206ENST00000528182 754 ntTSL 3 BASIC10.9□□□□□ -0.66
NDUFA1O15239 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NDUFA1O15239 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC10.9□□□□□ -0.66
NDUFA1O15239 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC10.9□□□□□ -0.66
NDUFA1O15239 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NDUFA1O15239 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NDUFA1O15239 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC10.9□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms