Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ATP2A1O14983 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
ATP2A1O14983 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.08■□□□□ 0.48
ATP2A1O14983 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
ATP2A1O14983 AC104989.1-201ENST00000519711 778 ntBASIC18.08■□□□□ 0.48
ATP2A1O14983 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.08■□□□□ 0.48
ATP2A1O14983 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC18.08■□□□□ 0.48
ATP2A1O14983 TDH-203ENST00000531764 1110 ntBASIC18.08■□□□□ 0.48
ATP2A1O14983 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.08■□□□□ 0.48
ATP2A1O14983 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.08■□□□□ 0.48
ATP2A1O14983 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.08■□□□□ 0.48
ATP2A1O14983 AL022328.1-201ENST00000610050 478 ntBASIC18.08■□□□□ 0.48
ATP2A1O14983 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.08■□□□□ 0.48
ATP2A1O14983 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ATP2A1O14983 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
ATP2A1O14983 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.48
ATP2A1O14983 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATP2A1O14983 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ATP2A1O14983 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ATP2A1O14983 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.08■□□□□ 0.48
ATP2A1O14983 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATP2A1O14983 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
ATP2A1O14983 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A1O14983 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ATP2A1O14983 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A1O14983 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A1O14983 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.07■□□□□ 0.48
ATP2A1O14983 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A1O14983 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
ATP2A1O14983 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A1O14983 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.07■□□□□ 0.48
ATP2A1O14983 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.07■□□□□ 0.48
ATP2A1O14983 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A1O14983 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A1O14983 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.07■□□□□ 0.48
ATP2A1O14983 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A1O14983 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
ATP2A1O14983 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.07■□□□□ 0.48
ATP2A1O14983 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A1O14983 VDAC1P7-201ENST00000462417 847 ntBASIC18.07■□□□□ 0.48
ATP2A1O14983 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A1O14983 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A1O14983 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.07■□□□□ 0.48
ATP2A1O14983 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.07■□□□□ 0.48
ATP2A1O14983 PTP4A1P2-201ENST00000546033 454 ntBASIC18.07■□□□□ 0.48
ATP2A1O14983 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A1O14983 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.07■□□□□ 0.48
ATP2A1O14983 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.07■□□□□ 0.48
ATP2A1O14983 CLUHP6-201ENST00000580789 941 ntBASIC18.07■□□□□ 0.48
ATP2A1O14983 MIR6799-201ENST00000620297 69 ntBASIC18.07■□□□□ 0.48
ATP2A1O14983 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.07■□□□□ 0.48
ATP2A1O14983 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
ATP2A1O14983 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.07■□□□□ 0.48
ATP2A1O14983 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.07■□□□□ 0.48
ATP2A1O14983 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
ATP2A1O14983 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.07■□□□□ 0.48
ATP2A1O14983 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
ATP2A1O14983 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ATP2A1O14983 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
ATP2A1O14983 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A1O14983 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.07■□□□□ 0.48
ATP2A1O14983 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A1O14983 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.07■□□□□ 0.48
ATP2A1O14983 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A1O14983 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A1O14983 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2A1O14983 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2A1O14983 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2A1O14983 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.06■□□□□ 0.48
ATP2A1O14983 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.06■□□□□ 0.48
ATP2A1O14983 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2A1O14983 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2A1O14983 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2A1O14983 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2A1O14983 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
ATP2A1O14983 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.06■□□□□ 0.48
ATP2A1O14983 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.06■□□□□ 0.48
ATP2A1O14983 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2A1O14983 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2A1O14983 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.06■□□□□ 0.48
ATP2A1O14983 AC026410.3-201ENST00000514280 936 ntBASIC18.06■□□□□ 0.48
ATP2A1O14983 AP001889.1-201ENST00000525414 633 ntBASIC18.06■□□□□ 0.48
ATP2A1O14983 AC068587.3-201ENST00000526613 355 ntBASIC18.06■□□□□ 0.48
ATP2A1O14983 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
ATP2A1O14983 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.06■□□□□ 0.48
ATP2A1O14983 AC009486.1-201ENST00000569860 813 ntBASIC18.06■□□□□ 0.48
ATP2A1O14983 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.06■□□□□ 0.48
ATP2A1O14983 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.06■□□□□ 0.48
ATP2A1O14983 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.06■□□□□ 0.48
ATP2A1O14983 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2A1O14983 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2A1O14983 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
ATP2A1O14983 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2A1O14983 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.06■□□□□ 0.48
ATP2A1O14983 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.06■□□□□ 0.48
ATP2A1O14983 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.06■□□□□ 0.48
ATP2A1O14983 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.06■□□□□ 0.48
ATP2A1O14983 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2A1O14983 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.06■□□□□ 0.48
ATP2A1O14983 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms