Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RGPD3A6NKT7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RGPD3A6NKT7 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RGPD3A6NKT7 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC19.46■□□□□ 0.71
RGPD3A6NKT7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RGPD3A6NKT7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RGPD3A6NKT7 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RGPD3A6NKT7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RGPD3A6NKT7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RGPD3A6NKT7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.45■□□□□ 0.7
RGPD3A6NKT7 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RGPD3A6NKT7 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RGPD3A6NKT7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RGPD3A6NKT7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RGPD3A6NKT7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RGPD3A6NKT7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RGPD3A6NKT7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.45■□□□□ 0.7
RGPD3A6NKT7 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.45■□□□□ 0.7
RGPD3A6NKT7 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC19.45■□□□□ 0.7
RGPD3A6NKT7 MIR648-201ENST00000385046 94 ntBASIC19.45■□□□□ 0.7
RGPD3A6NKT7 AL627231.1-201ENST00000394467 1125 ntBASIC19.45■□□□□ 0.7
RGPD3A6NKT7 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RGPD3A6NKT7 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RGPD3A6NKT7 RN7SL81P-201ENST00000493781 261 ntBASIC19.45■□□□□ 0.7
RGPD3A6NKT7 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC19.45■□□□□ 0.7
RGPD3A6NKT7 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RGPD3A6NKT7 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC19.45■□□□□ 0.7
RGPD3A6NKT7 AC027237.1-201ENST00000560942 655 ntBASIC19.45■□□□□ 0.7
RGPD3A6NKT7 AC100827.2-201ENST00000563214 1194 ntBASIC19.45■□□□□ 0.7
RGPD3A6NKT7 MIR5196-201ENST00000578146 115 ntBASIC19.45■□□□□ 0.7
RGPD3A6NKT7 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RGPD3A6NKT7 AC138466.4-201ENST00000623965 852 ntBASIC19.45■□□□□ 0.7
RGPD3A6NKT7 AC025262.2-201ENST00000623975 1056 ntBASIC19.45■□□□□ 0.7
RGPD3A6NKT7 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RGPD3A6NKT7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.45■□□□□ 0.7
RGPD3A6NKT7 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
RGPD3A6NKT7 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RGPD3A6NKT7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RGPD3A6NKT7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RGPD3A6NKT7 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC19.45■□□□□ 0.7
RGPD3A6NKT7 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC19.45■□□□□ 0.7
RGPD3A6NKT7 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RGPD3A6NKT7 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RGPD3A6NKT7 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RGPD3A6NKT7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RGPD3A6NKT7 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RGPD3A6NKT7 HLA-K-203ENST00000430151 1046 ntBASIC19.44■□□□□ 0.7
RGPD3A6NKT7 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC19.44■□□□□ 0.7
RGPD3A6NKT7 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC19.44■□□□□ 0.7
RGPD3A6NKT7 AC103810.10-201ENST00000606504 343 ntBASIC19.44■□□□□ 0.7
RGPD3A6NKT7 AP003392.6-201ENST00000607709 325 ntBASIC19.44■□□□□ 0.7
RGPD3A6NKT7 AP001527.2-201ENST00000614441 631 ntBASIC19.44■□□□□ 0.7
RGPD3A6NKT7 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC19.44■□□□□ 0.7
RGPD3A6NKT7 CMC2-224ENST00000630396 481 ntTSL 5 BASIC19.44■□□□□ 0.7
RGPD3A6NKT7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RGPD3A6NKT7 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RGPD3A6NKT7 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RGPD3A6NKT7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.44■□□□□ 0.7
RGPD3A6NKT7 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC19.44■□□□□ 0.7
RGPD3A6NKT7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RGPD3A6NKT7 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RGPD3A6NKT7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RGPD3A6NKT7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.44■□□□□ 0.7
RGPD3A6NKT7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RGPD3A6NKT7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RGPD3A6NKT7 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RGPD3A6NKT7 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RGPD3A6NKT7 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RGPD3A6NKT7 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RGPD3A6NKT7 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RGPD3A6NKT7 DNM1P51-201ENST00000558149 522 ntBASIC19.44■□□□□ 0.7
RGPD3A6NKT7 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC19.44■□□□□ 0.7
RGPD3A6NKT7 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC19.44■□□□□ 0.7
RGPD3A6NKT7 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RGPD3A6NKT7 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RGPD3A6NKT7 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.43■□□□□ 0.7
RGPD3A6NKT7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.43■□□□□ 0.7
RGPD3A6NKT7 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RGPD3A6NKT7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RGPD3A6NKT7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RGPD3A6NKT7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.43■□□□□ 0.7
RGPD3A6NKT7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RGPD3A6NKT7 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RGPD3A6NKT7 AC239868.1-201ENST00000369385 493 ntBASIC19.43■□□□□ 0.7
RGPD3A6NKT7 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RGPD3A6NKT7 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RGPD3A6NKT7 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RGPD3A6NKT7 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RGPD3A6NKT7 PFN2-205ENST00000461868 613 ntTSL 2 BASIC19.43■□□□□ 0.7
RGPD3A6NKT7 POU5F1P2-201ENST00000521750 823 ntBASIC19.43■□□□□ 0.7
RGPD3A6NKT7 C2orf69P1-201ENST00000563532 1093 ntBASIC19.43■□□□□ 0.7
RGPD3A6NKT7 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC19.43■□□□□ 0.7
RGPD3A6NKT7 RNF146-211ENST00000609447 607 ntTSL 4 BASIC19.43■□□□□ 0.7
RGPD3A6NKT7 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC19.43■□□□□ 0.7
RGPD3A6NKT7 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
RGPD3A6NKT7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RGPD3A6NKT7 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RGPD3A6NKT7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RGPD3A6NKT7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RGPD3A6NKT7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms