Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 MIR648-201ENST00000385046 94 ntBASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 C1QBPP1-201ENST00000400117 770 ntBASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 VDAC1P7-201ENST00000462417 847 ntBASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 PTP4A1P2-201ENST00000546033 454 ntBASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 AC097359.3-201ENST00000603982 1210 ntBASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 BCRP2-202ENST00000447763 634 ntBASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 AC119751.2-201ENST00000504529 210 ntBASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 BCRP6-201ENST00000510112 632 ntBASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 BCRP7-201ENST00000511549 544 ntBASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.04■□□□□ 0.16
TBC1D3BA6NDS4 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms