Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 FOSL1P1-201ENST00000511041 816 ntBASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 PMS2P7-201ENST00000506558 1336 ntBASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 CXCL1P1-201ENST00000502804 216 ntBASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 AL137784.3-201ENST00000623858 2288 ntBASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV3S1A0A5B6 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.84□□□□□ -0.03
TCRBV3S1A0A5B6 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms