Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
A0A1W2PRF3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
A0A1W2PRF3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
A0A1W2PRF3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
A0A1W2PRF3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
A0A1W2PRF3 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.11□□□□□ -0.31
A0A1W2PRF3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
A0A1W2PRF3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
A0A1W2PRF3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
A0A1W2PRF3 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
A0A1W2PRF3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
A0A1W2PRF3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
A0A1W2PRF3 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
A0A1W2PRF3 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
A0A1W2PRF3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
A0A1W2PRF3 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
A0A1W2PRF3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
A0A1W2PRF3 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.11□□□□□ -0.31
A0A1W2PRF3 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.11□□□□□ -0.31
A0A1W2PRF3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
A0A1W2PRF3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.11□□□□□ -0.31
A0A1W2PRF3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
A0A1W2PRF3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.11□□□□□ -0.31
A0A1W2PRF3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.11□□□□□ -0.31
A0A1W2PRF3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.11□□□□□ -0.31
A0A1W2PRF3 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.11□□□□□ -0.31
A0A1W2PRF3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.11□□□□□ -0.31
A0A1W2PRF3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
A0A1W2PRF3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
A0A1W2PRF3 AJ011932.1-201ENST00000621707 465 ntBASIC13.11□□□□□ -0.31
A0A1W2PRF3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.11□□□□□ -0.31
A0A1W2PRF3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.11□□□□□ -0.31
A0A1W2PRF3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
A0A1W2PRF3 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
A0A1W2PRF3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.11□□□□□ -0.31
A0A1W2PRF3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
A0A1W2PRF3 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
A0A1W2PRF3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
A0A1W2PRF3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.11□□□□□ -0.31
A0A1W2PRF3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.11□□□□□ -0.31
A0A1W2PRF3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
A0A1W2PRF3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
A0A1W2PRF3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
A0A1W2PRF3 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
A0A1W2PRF3 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
A0A1W2PRF3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
A0A1W2PRF3 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
A0A1W2PRF3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
A0A1W2PRF3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
A0A1W2PRF3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.1□□□□□ -0.31
A0A1W2PRF3 PRAL-201ENST00000624952 3286 ntBASIC13.1□□□□□ -0.31
A0A1W2PRF3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
A0A1W2PRF3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.1□□□□□ -0.31
A0A1W2PRF3 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
A0A1W2PRF3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
A0A1W2PRF3 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
A0A1W2PRF3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.1□□□□□ -0.31
A0A1W2PRF3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
A0A1W2PRF3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
A0A1W2PRF3 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
A0A1W2PRF3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.1□□□□□ -0.31
A0A1W2PRF3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
A0A1W2PRF3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
A0A1W2PRF3 AC006449.5-201ENST00000610658 2098 ntBASIC13.1□□□□□ -0.31
A0A1W2PRF3 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
A0A1W2PRF3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.1□□□□□ -0.31
A0A1W2PRF3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
A0A1W2PRF3 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
A0A1W2PRF3 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
A0A1W2PRF3 AL080243.2-201ENST00000418783 582 ntBASIC13.1□□□□□ -0.31
A0A1W2PRF3 RN7SL618P-201ENST00000477850 296 ntBASIC13.1□□□□□ -0.31
A0A1W2PRF3 AC004890.2-204ENST00000481968 304 ntBASIC13.1□□□□□ -0.31
A0A1W2PRF3 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
A0A1W2PRF3 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.1□□□□□ -0.31
A0A1W2PRF3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
A0A1W2PRF3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.1□□□□□ -0.31
A0A1W2PRF3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.1□□□□□ -0.31
A0A1W2PRF3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
A0A1W2PRF3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.1□□□□□ -0.31
A0A1W2PRF3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.1□□□□□ -0.31
A0A1W2PRF3 AC134407.2-201ENST00000625089 1978 ntBASIC13.1□□□□□ -0.31
A0A1W2PRF3 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
A0A1W2PRF3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
A0A1W2PRF3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
A0A1W2PRF3 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
A0A1W2PRF3 CYP4F24P-201ENST00000586049 1580 ntBASIC13.1□□□□□ -0.31
A0A1W2PRF3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
A0A1W2PRF3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
A0A1W2PRF3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
A0A1W2PRF3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
A0A1W2PRF3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
A0A1W2PRF3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
A0A1W2PRF3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
A0A1W2PRF3 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
A0A1W2PRF3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
A0A1W2PRF3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
A0A1W2PRF3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
A0A1W2PRF3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
A0A1W2PRF3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
A0A1W2PRF3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms