Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 CICP13-201ENST00000422015 2789 ntBASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC196A0A1B0GTZ2 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 TARDBPP1-201ENST00000442013 1203 ntBASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 AC025048.3-201ENST00000590609 569 ntBASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 AC005702.4-201ENST00000618393 416 ntBASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC196A0A1B0GTZ2 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC196A0A1B0GTZ2 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC196A0A1B0GTZ2 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC196A0A1B0GTZ2 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC196A0A1B0GTZ2 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC196A0A1B0GTZ2 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CCDC196A0A1B0GTZ2 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CCDC196A0A1B0GTZ2 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CCDC196A0A1B0GTZ2 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC196A0A1B0GTZ2 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC196A0A1B0GTZ2 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CCDC196A0A1B0GTZ2 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC196A0A1B0GTZ2 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC196A0A1B0GTZ2 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC196A0A1B0GTZ2 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC196A0A1B0GTZ2 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC196A0A1B0GTZ2 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC196A0A1B0GTZ2 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC196A0A1B0GTZ2 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC196A0A1B0GTZ2 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.42■□□□□ 0.54
CCDC196A0A1B0GTZ2 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC196A0A1B0GTZ2 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.42■□□□□ 0.54
CCDC196A0A1B0GTZ2 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC196A0A1B0GTZ2 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
CCDC196A0A1B0GTZ2 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
CCDC196A0A1B0GTZ2 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC196A0A1B0GTZ2 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CCDC196A0A1B0GTZ2 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC196A0A1B0GTZ2 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC196A0A1B0GTZ2 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC196A0A1B0GTZ2 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC196A0A1B0GTZ2 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CCDC196A0A1B0GTZ2 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.42■□□□□ 0.54
CCDC196A0A1B0GTZ2 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CCDC196A0A1B0GTZ2 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC196A0A1B0GTZ2 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC196A0A1B0GTZ2 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 213.2 ms