Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAV18A0A075B6X5 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAV18A0A075B6X5 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV18A0A075B6X5 AL390755.1-201ENST00000623716 2027 ntBASIC13.72□□□□□ -0.21
TRAV18A0A075B6X5 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TRAV18A0A075B6X5 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV18A0A075B6X5 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TRAV18A0A075B6X5 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
TRAV18A0A075B6X5 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV18A0A075B6X5 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TRAV18A0A075B6X5 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV18A0A075B6X5 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV18A0A075B6X5 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAV18A0A075B6X5 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV18A0A075B6X5 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAV18A0A075B6X5 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV18A0A075B6X5 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV18A0A075B6X5 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV18A0A075B6X5 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.71□□□□□ -0.21
TRAV18A0A075B6X5 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV18A0A075B6X5 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV18A0A075B6X5 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV18A0A075B6X5 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TRAV18A0A075B6X5 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV18A0A075B6X5 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV18A0A075B6X5 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV18A0A075B6X5 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TRAV18A0A075B6X5 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV18A0A075B6X5 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV18A0A075B6X5 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV18A0A075B6X5 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV18A0A075B6X5 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV18A0A075B6X5 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV18A0A075B6X5 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV18A0A075B6X5 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV18A0A075B6X5 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.71□□□□□ -0.21
TRAV18A0A075B6X5 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TRAV18A0A075B6X5 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
TRAV18A0A075B6X5 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV18A0A075B6X5 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV18A0A075B6X5 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TRAV18A0A075B6X5 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV18A0A075B6X5 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV18A0A075B6X5 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV18A0A075B6X5 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.71□□□□□ -0.21
TRAV18A0A075B6X5 PMS2P4-201ENST00000412466 1052 ntBASIC13.71□□□□□ -0.21
TRAV18A0A075B6X5 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.71□□□□□ -0.21
TRAV18A0A075B6X5 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV18A0A075B6X5 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV18A0A075B6X5 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV18A0A075B6X5 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV18A0A075B6X5 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV18A0A075B6X5 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.71□□□□□ -0.22
TRAV18A0A075B6X5 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV18A0A075B6X5 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.71□□□□□ -0.22
TRAV18A0A075B6X5 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
TRAV18A0A075B6X5 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.71□□□□□ -0.22
TRAV18A0A075B6X5 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV18A0A075B6X5 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV18A0A075B6X5 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV18A0A075B6X5 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV18A0A075B6X5 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV18A0A075B6X5 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.71□□□□□ -0.22
TRAV18A0A075B6X5 KRT8P44-201ENST00000441609 1350 ntBASIC13.71□□□□□ -0.22
TRAV18A0A075B6X5 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.71□□□□□ -0.22
TRAV18A0A075B6X5 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV18A0A075B6X5 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 HMGA1P7-201ENST00000406908 502 ntBASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 RIN3-211ENST00000557762 517 ntTSL 3 BASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 AL049597.2-201ENST00000565575 961 ntBASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 AC087388.1-201ENST00000571370 1112 ntBASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 AC008667.4-201ENST00000607370 168 ntBASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 WASH6P-202ENST00000359512 1437 ntBASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms