Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 MIR3180-5-201ENST00000583743 153 ntBASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LINC01558Q9Y6Z2 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 STRN-202ENST00000379213 2254 ntTSL 5 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 KRT18P23-201ENST00000435622 1283 ntBASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 IGHV3-52-201ENST00000519770 353 ntBASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 MIR3621-201ENST00000580529 85 ntBASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 MIR4767-201ENST00000582827 78 ntBASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms