Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 CFL1-214ENST00000534769 758 ntTSL 2 BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 RN7SL774P-201ENST00000577467 290 ntBASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 TUBBP5-203ENST00000508529 1334 ntBASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTCH2Q9Y6C5 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 AC079178.1-201ENST00000420915 656 ntBASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 AC104784.1-201ENST00000473096 294 ntBASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 MIR3147-201ENST00000577811 66 ntBASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 AC026740.1-201ENST00000607068 791 ntBASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 AC091544.8-201ENST00000619490 361 ntBASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 AC105020.1-201ENST00000435356 2205 ntBASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PTCH2Q9Y6C5 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTCH2Q9Y6C5 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PTCH2Q9Y6C5 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTCH2Q9Y6C5 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTCH2Q9Y6C5 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PTCH2Q9Y6C5 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTCH2Q9Y6C5 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTCH2Q9Y6C5 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.68■□□□□ 0.42
PTCH2Q9Y6C5 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTCH2Q9Y6C5 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTCH2Q9Y6C5 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTCH2Q9Y6C5 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTCH2Q9Y6C5 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTCH2Q9Y6C5 UFM1-202ENST00000379649 846 ntTSL 4 BASIC17.68■□□□□ 0.42
PTCH2Q9Y6C5 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC17.68■□□□□ 0.42
PTCH2Q9Y6C5 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.68■□□□□ 0.42
PTCH2Q9Y6C5 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTCH2Q9Y6C5 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC17.68■□□□□ 0.42
PTCH2Q9Y6C5 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC17.68■□□□□ 0.42
PTCH2Q9Y6C5 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.68■□□□□ 0.42
PTCH2Q9Y6C5 AP000346.4-201ENST00000614827 381 ntBASIC17.68■□□□□ 0.42
PTCH2Q9Y6C5 HLA-C-210ENST00000640219 976 ntBASIC17.68■□□□□ 0.42
PTCH2Q9Y6C5 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTCH2Q9Y6C5 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.68■□□□□ 0.42
PTCH2Q9Y6C5 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTCH2Q9Y6C5 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms