Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 KRT8P19-201ENST00000551916 1455 ntBASIC15.15■□□□□ 0.02
LHX6Q9UPM6 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 MIR326-201ENST00000362220 95 ntBASIC15.15■□□□□ 0.02
LHX6Q9UPM6 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 ACTG1P3-201ENST00000431775 1114 ntBASIC15.15■□□□□ 0.02
LHX6Q9UPM6 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 AL022319.1-201ENST00000458183 1167 ntBASIC15.15■□□□□ 0.02
LHX6Q9UPM6 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 ADM-202ENST00000524948 584 ntTSL 2 BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 CU634019.7-201ENST00000624153 1185 ntBASIC15.15■□□□□ 0.02
LHX6Q9UPM6 FP236241.2-201ENST00000624906 1185 ntBASIC15.15■□□□□ 0.02
LHX6Q9UPM6 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LHX6Q9UPM6 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 AL021920.2-201ENST00000624828 1351 ntBASIC15.14■□□□□ 0.01
LHX6Q9UPM6 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 FRMD8P1-201ENST00000440433 1524 ntBASIC15.14■□□□□ 0.01
LHX6Q9UPM6 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 LINC00469-201ENST00000321800 708 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 MIR33B-201ENST00000385104 96 ntBASIC15.14■□□□□ 0.01
LHX6Q9UPM6 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 RN7SL769P-201ENST00000469386 295 ntBASIC15.14■□□□□ 0.01
LHX6Q9UPM6 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 SCARNA20.5-201ENST00000516991 142 ntBASIC15.14■□□□□ 0.01
LHX6Q9UPM6 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 MIR4492-201ENST00000581627 80 ntBASIC15.14■□□□□ 0.01
LHX6Q9UPM6 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC15.14■□□□□ 0.01
LHX6Q9UPM6 AC068620.4-201ENST00000636730 1182 ntBASIC15.14■□□□□ 0.01
LHX6Q9UPM6 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 AC016396.2-201ENST00000562575 1417 ntBASIC15.14■□□□□ 0.01
LHX6Q9UPM6 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms