Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 RPL7P3-201ENST00000441388 714 ntBASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 KRT223P-202ENST00000449164 1292 ntBASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 FO681548.1-201ENST00000455617 1132 ntBASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 SNX29P1-201ENST00000548357 1007 ntBASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 MIR6775-201ENST00000617557 69 ntBASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 BX539320.1-201ENST00000623759 877 ntBASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 PRSS30P-206ENST00000641773 873 ntBASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNPO2Q9UMS6 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 LTB4R2-202ENST00000528054 3092 ntBASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 AC084364.1-201ENST00000551967 1556 ntBASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 ANKRD19P-201ENST00000338192 862 ntBASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 BCRP2-202ENST00000447763 634 ntBASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 BCRP6-201ENST00000510112 632 ntBASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 BCRP7-201ENST00000511549 544 ntBASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNPO2Q9UMS6 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 AC093525.8-201ENST00000624099 1342 ntBASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 KLF2P4-201ENST00000451959 1225 ntBASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 KRT18P25-201ENST00000508931 1278 ntBASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms