Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 AL512343.1-201ENST00000605837 169 ntBASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 MIR8072-201ENST00000614241 80 ntBASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 MIR6799-201ENST00000620297 69 ntBASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 CLK3P2-201ENST00000427566 1453 ntBASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF3Q9HD45 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 PKD1P5-201ENST00000532415 10291 ntBASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 AC104596.2-201ENST00000512793 793 ntBASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 AL033527.5-201ENST00000641382 801 ntBASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 CDC14C-201ENST00000428251 1719 ntBASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TM9SF3Q9HD45 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF3Q9HD45 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms