Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.23■□□□□ 0.35
HIPK3Q9H422 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK3Q9H422 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK3Q9H422 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK3Q9H422 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK3Q9H422 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
HIPK3Q9H422 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK3Q9H422 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.23■□□□□ 0.35
HIPK3Q9H422 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.23■□□□□ 0.35
HIPK3Q9H422 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK3Q9H422 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HIPK3Q9H422 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK3Q9H422 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK3Q9H422 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.23■□□□□ 0.35
HIPK3Q9H422 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.23■□□□□ 0.35
HIPK3Q9H422 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK3Q9H422 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK3Q9H422 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.23■□□□□ 0.35
HIPK3Q9H422 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.23■□□□□ 0.35
HIPK3Q9H422 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK3Q9H422 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.23■□□□□ 0.35
HIPK3Q9H422 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
HIPK3Q9H422 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.23■□□□□ 0.35
HIPK3Q9H422 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.23■□□□□ 0.35
HIPK3Q9H422 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK3Q9H422 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.23■□□□□ 0.35
HIPK3Q9H422 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HIPK3Q9H422 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK3Q9H422 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.23■□□□□ 0.35
HIPK3Q9H422 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK3Q9H422 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.23■□□□□ 0.35
HIPK3Q9H422 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK3Q9H422 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK3Q9H422 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.23■□□□□ 0.35
HIPK3Q9H422 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK3Q9H422 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HIPK3Q9H422 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK3Q9H422 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.22■□□□□ 0.35
HIPK3Q9H422 AHCYP2-201ENST00000430630 1300 ntBASIC17.22■□□□□ 0.35
HIPK3Q9H422 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK3Q9H422 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK3Q9H422 AC078925.2-201ENST00000624013 1973 ntBASIC17.22■□□□□ 0.35
HIPK3Q9H422 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HIPK3Q9H422 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK3Q9H422 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK3Q9H422 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK3Q9H422 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK3Q9H422 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK3Q9H422 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK3Q9H422 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK3Q9H422 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK3Q9H422 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.22■□□□□ 0.35
HIPK3Q9H422 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.22■□□□□ 0.35
HIPK3Q9H422 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
HIPK3Q9H422 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK3Q9H422 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK3Q9H422 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK3Q9H422 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK3Q9H422 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK3Q9H422 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK3Q9H422 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.22■□□□□ 0.35
HIPK3Q9H422 AL591846.1-201ENST00000451736 433 ntBASIC17.22■□□□□ 0.35
HIPK3Q9H422 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
HIPK3Q9H422 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC17.22■□□□□ 0.35
HIPK3Q9H422 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HIPK3Q9H422 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK3Q9H422 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK3Q9H422 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK3Q9H422 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK3Q9H422 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK3Q9H422 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK3Q9H422 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.22■□□□□ 0.35
HIPK3Q9H422 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
HIPK3Q9H422 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK3Q9H422 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK3Q9H422 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
HIPK3Q9H422 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK3Q9H422 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK3Q9H422 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK3Q9H422 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
HIPK3Q9H422 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK3Q9H422 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK3Q9H422 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.22■□□□□ 0.35
HIPK3Q9H422 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIPK3Q9H422 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.21■□□□□ 0.35
HIPK3Q9H422 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIPK3Q9H422 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.21■□□□□ 0.35
HIPK3Q9H422 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HIPK3Q9H422 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIPK3Q9H422 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIPK3Q9H422 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.21■□□□□ 0.35
HIPK3Q9H422 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.21■□□□□ 0.35
HIPK3Q9H422 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.21■□□□□ 0.35
HIPK3Q9H422 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.21■□□□□ 0.35
HIPK3Q9H422 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HIPK3Q9H422 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HIPK3Q9H422 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIPK3Q9H422 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIPK3Q9H422 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIPK3Q9H422 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms